RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 MSH3P20585 1137 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 KCNA4P22459 653 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 CARSP49589 748 aaKnown RBP12.86□□□□□ -0.35
CHFR-216ENST00000538235 GPX6P59796 221 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 SIM1P81133 766 aaPredicted RBP12.86□□□□□ -0.35
CHFR-216ENST00000538235 SARNPP82979 210 aaKnown RBP12.86□□□□□ -0.35
CHFR-216ENST00000538235 TIAL1Q01085 375 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHFR-216ENST00000538235 DMPKQ09013 629 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 ILF3Q12906 894 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHFR-216ENST00000538235 CTBP1Q13363 440 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 ITIH4Q14624 930 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 PUM1Q14671 1186 aaKnown RBP eCLIP12.86□□□□□ -0.35
CHFR-216ENST00000538235 CLCA4Q14CN2 919 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 SEPT7Q16181 437 aaKnown RBP12.86□□□□□ -0.35
CHFR-216ENST00000538235 INSCQ1MX18 579 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 N4BP2L1Q5TBK1 243 aaPredicted RBP12.86□□□□□ -0.35
CHFR-216ENST00000538235 CAPN12Q6ZSI9 719 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 TMPRSS9Q7Z410 1059 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 VRK3Q8IV63 474 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 ACVR1CQ8NER5 493 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 SPDYE1Q8NFV5 336 aaPredicted RBP12.86□□□□□ -0.35
CHFR-216ENST00000538235 ZDHHC1Q8WTX9 485 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 LINC00615Q96LM1 132 aaPredicted RBP12.86□□□□□ -0.35
CHFR-216ENST00000538235 BIRC8Q96P09 236 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 SLC30A3Q99726 388 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 GSDMCQ9BYG8 508 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 EPB41L5Q9HCM4 733 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 SAYSD1Q9NPB0 183 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 FBXO6Q9NRD1 293 aaPredicted RBP12.86□□□□□ -0.35
CHFR-216ENST00000538235 ZNF624Q9P2J8 865 aaPredicted RBP12.86□□□□□ -0.35
CHFR-216ENST00000538235 CDYLQ9Y232 598 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 PSAT1Q9Y617 370 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 RNF215Q9Y6U7 377 aa12.86□□□□□ -0.35
CHFR-216ENST00000538235 ANKRD12Q6UB98 2062 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 OR52A4PA6NMU1 304 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 GPR89AB7ZAQ6 455 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 AP3B1O00203 1094 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 PPM1DO15297 605 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 NIPSNAP2O75323 286 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 S1PR4O95977 384 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 GPR89BP0CG08 455 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 CEACAM1P13688 526 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 ACP1P24666 158 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 RPL10P27635 214 aaKnown RBP12.85□□□□□ -0.35
CHFR-216ENST00000538235 PDHA2P29803 388 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 SSTR1P30872 391 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 PREPP48147 710 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 CLCNKAP51800 687 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 PDX1P52945 283 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 ARL4CP56559 192 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 TUBB2AQ13885 445 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 LRP8Q14114 963 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 SUZ12Q15022 739 aaKnown RBP12.85□□□□□ -0.35
CHFR-216ENST00000538235 FASTKD1Q53R41 847 aaKnown RBP12.85□□□□□ -0.35
CHFR-216ENST00000538235 HSP90AA5PQ58FG0 334 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 ZNF470Q6ECI4 717 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 MTERF4Q7Z6M4 381 aaKnown RBP12.85□□□□□ -0.35
CHFR-216ENST00000538235 GKN2Q86XP6 184 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 CILP2Q8IUL8 1156 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 ZBED8Q8IZ13 594 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 SFRP1Q8N474 314 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 ARL14Q8N4G2 192 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 ARL10Q8N8L6 244 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.85□□□□□ -0.35
CHFR-216ENST00000538235 GIMAP7Q8NHV1 300 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 CCDC74AQ96AQ1 378 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 C9orf72Q96LT7 481 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 TUBB2BQ9BVA1 445 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 RAB17Q9H0T7 212 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 OSGEPL1Q9H4B0 414 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 SAMD15Q9P1V8 674 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 PSMD13Q9UNM6 376 aa12.85□□□□□ -0.35
CHFR-216ENST00000538235 WDFY3Q8IZQ1 3526 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 FRYQ5TBA9 3013 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 A0A1W2PQM1 296 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 EME2A4GXA9 379 aaPredicted RBP12.84□□□□□ -0.35
CHFR-216ENST00000538235 CXorf49A8MYA2 514 aaPredicted RBP12.84□□□□□ -0.35
CHFR-216ENST00000538235 TNFSF14O43557 240 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 SNX2O60749 519 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 RHOXF2BP0C7M4 288 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 CKMT2P17540 419 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 SPINK2P20155 84 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 OGNP20774 298 aaKnown RBP12.84□□□□□ -0.35
CHFR-216ENST00000538235 CCR7P32248 378 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 SLC19A1P41440 591 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 UBE2IP63279 158 aaKnown RBP12.84□□□□□ -0.35
CHFR-216ENST00000538235 GTF2H3Q13889 308 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 EFTUD2Q15029 972 aaKnown RBP eCLIP12.84□□□□□ -0.356e-10■■■■■ 68
CHFR-216ENST00000538235 LONRF1Q17RB8 773 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 C14orf28Q4W4Y0 310 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 CCDC157Q569K6 752 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 DNAJC21Q5F1R6 531 aaKnown RBP12.84□□□□□ -0.35
CHFR-216ENST00000538235 SPANXN3Q5MJ09 141 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.84□□□□□ -0.35
CHFR-216ENST00000538235 NEPROQ6NW34 567 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 CNSTQ6PJW8 725 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 LVRNQ6Q4G3 990 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 DHRS13Q6UX07 377 aa12.84□□□□□ -0.35
CHFR-216ENST00000538235 EFL1Q7Z2Z2 1120 aaKnown RBP12.84□□□□□ -0.35
CHFR-216ENST00000538235 KCNMB4Q86W47 210 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms