RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 CYP2C8P10632 490 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 ZP3P21754 424 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 CPN2P22792 545 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 TGFBR1P36897 503 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 ATP4BP51164 291 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 SLC35A2P78381 396 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 IL5RAQ01344 420 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 ZNF543Q08ER8 600 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 USP17L24Q0WX57 530 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 NFIAQ12857 509 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 CSTF3Q12996 717 aaKnown RBP8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 KCNAB2Q13303 367 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 LAMTOR1Q6IAA8 161 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 CLEC14AQ86T13 490 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 PROSER1Q86XN7 944 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 TRIM48Q8IWZ4 208 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 FAM84AQ96KN4 292 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 RBM14Q96PK6 669 aaKnown RBP8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 SDHCQ99643 169 aaPredicted RBP8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 LDAHQ9H6V9 325 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 KCTD5Q9NXV2 234 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 CYB5R1Q9UHQ9 305 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 ACAD8Q9UKU7 415 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 VAV3Q9UKW4 847 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 RNF112Q9ULX5 631 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 BAIAP2Q9UQB8 552 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 MRPL11Q9Y3B7 192 aaKnown RBP8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 DAGLAQ9Y4D2 1042 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 ORC6Q9Y5N6 252 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 SESN1Q9Y6P5 492 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 U3KQV3 271 aa8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 RBBP6Q7Z6E9 1792 aaKnown RBP8.44□□□□□ -1.06
SRGAP1-202ENST00000537556 ARFGEF1Q9Y6D6 1849 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 TISP43B9A030 160 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 POLRMTO00411 1230 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 DSCR3O14972 297 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 RGS20O76081 388 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 LDOC1O95751 146 aaPredicted RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 TSPAN12O95859 305 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 CDK1P06493 297 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 NPR1P16066 1061 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 CTSKP43235 329 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 MAP2K6P52564 334 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 PCDH1Q08174 1060 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 QPRTQ15274 297 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 RFX4Q33E94 735 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 HSDL1Q3SXM5 330 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 GPATCH4Q5T3I0 446 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 ZNF470Q6ECI4 717 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 LAIR2Q6ISS4 152 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 SCARA5Q6ZMJ2 495 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 CBWD2Q8IUF1 395 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 RBFAQ8N0V3 343 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 ZNF366Q8N895 744 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 SLC44A5Q8NCS7 719 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 SLC9A6Q92581 669 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 YIPF5Q969M3 257 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 SIPA1Q96FS4 1042 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 KLHL15Q96M94 604 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 PPP1R2P1Q96PQ5 205 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 CAMKK2Q96RR4 588 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 MMP28Q9H239 520 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 TMEM245Q9H330 911 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 DHX35Q9H5Z1 703 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 TASP1Q9H6P5 420 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 IL1RL2Q9HB29 575 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 LRRC4Q9HBW1 653 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 HPF1Q9NWY4 346 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 GPRC5BQ9NZH0 403 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 SRRDQ9UH36 339 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 PSAT1Q9Y617 370 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 TRAV20A0A0B4J274 112 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 WDR27A2RRH5 827 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 LRRC72A6NJI9 287 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 PRMT5O14744 637 aaPredicted RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 GNB5O14775 395 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 GATCO43716 136 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 NPHS1O60500 1241 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 FADS2O95864 444 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 RPLP0P05388 317 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 CFHP08603 1231 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 MLNP12872 115 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 ZNF3P17036 446 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 PGAM1P18669 254 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 TGFBR2P37173 567 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 ZNF169Q14929 603 aaPredicted RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 LTB4RQ15722 352 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 HSD17B12Q53GQ0 312 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 RUNDC3AQ59EK9 446 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 RBM23Q86U06 439 aaKnown RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 FAM160B2Q86V87 743 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 LRRTM3Q86VH5 581 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 ARL6IP6Q8N6S5 226 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 ARRDC4Q8NCT1 418 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 RAET1EQ8TD07 263 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 C18orf25Q96B23 403 aaPredicted RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 SERPINB11Q96P15 392 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 RBBP8Q99708 897 aa8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 MLPHQ9BV36 600 aaPredicted RBP8.43□□□□□ -1.06
SRGAP1-202ENST00000537556 AMBRA1Q9C0C7 1298 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms