RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 RP1L1Q8IWN7 2480 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 A0A0A6YYK5 440 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 IGHV5-51A0A0C4DH38 117 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TLCD2A6NGC4 264 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 PMPCBO75439 489 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 NDST3O95803 873 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 KLK3P07288 261 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 FOLR1P15328 257 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 KDELR1P24390 212 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 PBLDP30039 288 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SPAM1P38567 509 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CCL11P51671 97 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TAS2R40P59535 323 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 RPS18P62269 152 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 HSD11B2P80365 405 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SLC10A2Q12908 348 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CHAF1BQ13112 559 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 NR1I3Q14994 352 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CHRNA6Q15825 494 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SLC14A2Q15849 920 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 ATP13A5Q4VNC0 1218 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 LDLRAP1Q5SW96 308 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CPZQ66K79 652 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 FAM199XQ6PEV8 388 aaPredicted RBP12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 RFX6Q8HWS3 928 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 ZNF547Q8IVP9 402 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CNTD1Q8N815 330 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SLC41A2Q96JW4 573 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TRIB3Q96RU7 358 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 MAP3K3Q99759 626 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TRIM55Q9BYV6 548 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SLC7A5P2Q9GIP4 190 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 DEF6Q9H4E7 631 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SLAMF7Q9NQ25 335 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SNX7Q9UNH6 387 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 ZNF451Q9Y4E5 1061 aa12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 PCDHGA9Q9Y5G4 932 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SPTBN1Q01082 2364 aaKnown RBP12.7□□□□□ -0.38
TNFRSF1A-207ENST00000535958 NBPF19A0A087WUL8 3843 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 MAP3K7O43318 606 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 DPM1O60762 260 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 PDGFAP04085 211 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 KRT1P04264 644 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 AKT1P31749 480 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 GSDMDP57764 484 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 PPP1CAP62136 330 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 DYNLT1P63172 113 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TUBB4BP68371 445 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 PRKAA1Q13131 559 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 ITGA9Q13797 1035 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TUBB2AQ13885 445 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 KRT33BQ14525 404 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 MESDQ14696 234 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 NADK2Q4G0N4 442 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 KHDC1Q4VXA5 237 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 GLT6D1Q7Z4J2 308 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CPNE8Q86YQ8 564 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 PLD5Q8N7P1 536 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 GPR150Q8NGU9 434 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 OR8K5Q8NH50 307 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TUBB2BQ9BVA1 445 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 ING2Q9H160 280 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 TRABDQ9H4I3 376 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 HRASLS2Q9NWW9 162 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 FARSAQ9Y285 508 aaKnown RBP12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 WDR37Q9Y2I8 494 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 PKP3Q9Y446 797 aa12.69□□□□□ -0.38
TNFRSF1A-207ENST00000535958 GLYATL1P3A0A0U1RQE8 302 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 OR5K3A6NET4 321 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 OR2AG2A6NM03 316 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 POP7O75817 140 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 ZBTB11O95625 1053 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 MT-CYBP00156 380 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 MSH3P20585 1137 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 VARSP26640 1264 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 HMGCLP35914 325 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 UBASH3AP57075 661 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 DMPKQ09013 629 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 GSE1Q14687 1217 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 RPE65Q16518 533 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 LONRF2Q1L5Z9 754 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SLC9A4Q6AI14 798 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 FAM151BQ6UXP7 276 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 BZW1Q7L1Q6 419 aaKnown RBP12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 C11orf96Q7Z7L8 435 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 BEND7Q8N7W2 519 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 SPATA22Q8NHS9 363 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 BLOC1S5Q8TDH9 187 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CPT1BQ92523 772 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 RAPGEF5Q92565 580 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CLIP3Q96DZ5 547 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 RUFY1Q96T51 708 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 GLOD4Q9HC38 313 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 KCND1Q9NSA2 647 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 CUEDC1Q9NWM3 386 aaPredicted RBP12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 UBP1Q9NZI7 540 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 HACD3Q9P035 362 aa12.68□□□□□ -0.38
TNFRSF1A-207ENST00000535958 FAM8A1Q9UBU6 413 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms