RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 SARS2Q9NP81 518 aaKnown RBP22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 CDC23Q9UJX2 597 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 WDR37Q9Y2I8 494 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 PRSS21Q9Y6M0 314 aa22.32■■□□□ 1.16
SFSWAP-204ENST00000535399 FAM237BA0A1B0GVD1 139 aa22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 MAGEB16A2A368 324 aa22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 KLHL33A6NCF5 533 aa22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 PDZK1P1A8MUH7 402 aa22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 B4GAT1O43505 415 aa22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 RPLP0P05388 317 aaKnown RBP22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 RPL10P27635 214 aaKnown RBP22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 DRG2P55039 364 aaKnown RBP22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 UBE2IP63279 158 aaKnown RBP22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 MRPS25P82663 173 aaKnown RBP22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 MORF4L2Q15014 288 aa22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 METRNLQ641Q3 311 aa22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 FCRL3Q96P31 734 aaPredicted RBP22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 TMEM121BQ9BXQ6 578 aaPredicted RBP22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 CATSPERZQ9NTU4 200 aa22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 SAMD15Q9P1V8 674 aa22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 CPNE7Q9UBL6 633 aa22.31■■□□□ 1.16
SFSWAP-204ENST00000535399 FAM187AA6NFU0 413 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 OR1I1O60431 355 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 TCEA3O75764 348 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 URI1O94763 535 aaPredicted RBP22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 AP2A2O94973 939 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 VAPBO95292 243 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 NSG1P42857 185 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 GPR3P46089 330 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 ARCN1P48444 511 aaKnown RBP22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 OR1D5P58170 312 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 HHEXQ03014 270 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 BIRC2Q13490 618 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 CAMK2BQ13554 666 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 CLCA4Q14CN2 919 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 ANKRD20A4Q4UJ75 823 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 ZNF658BQ4V348 819 aaPredicted RBP22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 KIAA0930Q6ICG6 404 aaPredicted RBP22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 HIBCHQ6NVY1 386 aaPredicted RBP22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 TMEM135Q86UB9 458 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 SLC9B2Q86UD5 537 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 GATA6Q92908 595 aa22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 ZNF624Q9P2J8 865 aaPredicted RBP22.3■■□□□ 1.16
SFSWAP-204ENST00000535399 TP73O15350 636 aa22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 CD3EAPO15446 510 aaKnown RBP22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 RAD51CO43502 376 aa22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 SEC31AO94979 1220 aaKnown RBP22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 TUBB4AP04350 444 aa22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 XRCC1P18887 633 aaPredicted RBP22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 SLC19A1P41440 591 aa22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 AARS2Q5JTZ9 985 aaKnown RBP22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 RBM44Q6ZP01 1051 aaKnown RBP22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 LDB1Q86U70 411 aaPredicted RBP22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 LILRA3Q8N6C8 439 aaPredicted RBP22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 HM13Q8TCT9 377 aa22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 ZNF592Q92610 1267 aa22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 SNF8Q96H20 258 aa22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 DEPDC7Q96QD5 511 aa22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 TTC1Q99614 292 aa22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 CCM2Q9BSQ5 444 aa22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 TRIM31Q9BZY9 425 aa22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 SYNDIG1Q9H7V2 258 aa22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 PTPRBP23467 1997 aa22.29■■□□□ 1.16
SFSWAP-204ENST00000535399 CHD8Q9HCK8 2581 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 ZCWPW2A0A1B0GU75 182 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 C17orf113A0A1B0GUU1 675 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 OR52A4PA6NMU1 304 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 EFCAB8A8MWE9 144 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 CSO75390 466 aaKnown RBP22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 ALDH4A1P30038 563 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 RPL21P46778 160 aaKnown RBP22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 PDX1P52945 283 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 ITGA8P53708 1063 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 CKAP4Q07065 602 aaKnown RBP22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 SPIDRQ14159 915 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 MSS51Q4VC12 460 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 MAATS1Q7Z4T9 603 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 ZNF761Q86XN6 746 aaPredicted RBP22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 ZNF669Q96BR6 464 aaPredicted RBP22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 PWWP2AQ96N64 755 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 GFM1Q96RP9 751 aaKnown RBP22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 ANAPC5Q9UJX4 755 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 ACSL5Q9ULC5 683 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 ATXN7L1Q9ULK2 861 aaPredicted RBP22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 SNX24Q9Y343 169 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 MAD1L1Q9Y6D9 718 aa22.28■■□□□ 1.16
SFSWAP-204ENST00000535399 ZFC3H1O60293 1989 aaKnown RBP22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 D6RAR5 112 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 GOLGA8KD6RF30 607 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 GOLGA8TH3BQL2 631 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 KIF2AO00139 706 aaPredicted RBP22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 SMAPO00193 183 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 PAMP19021 973 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 CD1CP29017 333 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 PPARGP37231 505 aaPredicted RBP22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 DHX9Q08211 1270 aaKnown RBP22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 WHAMMP3Q1A5X7 153 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 ISXQ2M1V0 245 aa22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 DNAJC21Q5F1R6 531 aaKnown RBP22.27■■□□□ 1.16
SFSWAP-204ENST00000535399 CFAP206Q8IYR0 622 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms