RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	ZNF479	Q96JC4	524 aa		4.65	□□□□□ -1.67
ATM-223	ENST00000533979	C16orf45	Q96MC5	204 aa	Predicted RBP	4.65	□□□□□ -1.67
ATM-223	ENST00000533979	INTS14	Q96SY0	518 aa		4.65	□□□□□ -1.67
ATM-223	ENST00000533979	C1QTNF1	Q9BXJ1	281 aa		4.65	□□□□□ -1.67
ATM-223	ENST00000533979	CADM1	Q9BY67	442 aa	Known RBP	4.65	□□□□□ -1.67
ATM-223	ENST00000533979	GPR88	Q9GZN0	384 aa		4.65	□□□□□ -1.67
ATM-223	ENST00000533979	PLEKHA4	Q9H4M7	779 aa		4.65	□□□□□ -1.67
ATM-223	ENST00000533979	PLAC1	Q9HBJ0	212 aa		4.65	□□□□□ -1.67
ATM-223	ENST00000533979	WNT16	Q9UBV4	365 aa		4.65	□□□□□ -1.67
ATM-223	ENST00000533979	HOOK1	Q9UJC3	728 aa	Known RBP	4.65	□□□□□ -1.67
ATM-223	ENST00000533979	CDH7	Q9ULB5	785 aa		4.65	□□□□□ -1.67
ATM-223	ENST00000533979	EXO1	Q9UQ84	846 aa	Known RBP	4.65	□□□□□ -1.67
ATM-223	ENST00000533979	RRP15	Q9Y3B9	282 aa	Known RBP	4.65	□□□□□ -1.67
ATM-223	ENST00000533979	CMAHP	Q9Y471	501 aa		4.65	□□□□□ -1.67
ATM-223	ENST00000533979	PCDHGA5	Q9Y5G8	931 aa		4.65	□□□□□ -1.67
ATM-223	ENST00000533979	PCDHGA1	Q9Y5H4	931 aa		4.65	□□□□□ -1.67
ATM-223	ENST00000533979	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	4.65	□□□□□ -1.67
ATM-223	ENST00000533979	HECW1	Q76N89	1606 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	FGD6	Q6ZV73	1430 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	ROBO1	Q9Y6N7	1651 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	SIGLEC1	Q9BZZ2	1709 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	TRBV5-7	A0A0A0MS05	114 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	LNP1	A1A4G5	178 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	CBY3	A6NI87	242 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	OR6C75	A6NL08	312 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	ANXA2P2	A6NMY6	339 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	C4orf47	A7E2U8	309 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	NPIPB11	E5RHQ5	1161 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	PLRG1	O43660	514 aa	Known RBP	4.64	□□□□□ -1.67
ATM-223	ENST00000533979	BCAS2	O75934	225 aa	Predicted RBP	4.64	□□□□□ -1.67
ATM-223	ENST00000533979	TF	P02787	698 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	HMOX1	P09601	288 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	EEF2	P13639	858 aa	Known RBP	4.64	□□□□□ -1.67
ATM-223	ENST00000533979	IL7R	P16871	459 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	TYMP	P19971	482 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	TCEA1	P23193	301 aa	Known RBP	4.64	□□□□□ -1.67
ATM-223	ENST00000533979	HOXD3	P31249	432 aa	Predicted RBP	4.64	□□□□□ -1.67
ATM-223	ENST00000533979	TDO2	P48775	406 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	SUOX	P51687	545 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	CLCN3	P51790	818 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	YWHAZ	P63104	245 aa	Known RBP	4.64	□□□□□ -1.67
ATM-223	ENST00000533979	RHAG	Q02094	409 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	KLHL30	Q0D2K2	578 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	PPP2R5B	Q15173	497 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	HIST2H2AC	Q16777	129 aa	Predicted RBP	4.64	□□□□□ -1.67
ATM-223	ENST00000533979	KBTBD12	Q3ZCT8	623 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	SLC39A12	Q504Y0	691 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	TOR1AIP1	Q5JTV8	583 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	PPP1R21	Q6ZMI0	780 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	GBP6	Q6ZN66	633 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	SEPT14	Q6ZU15	432 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	HDDC3	Q8N4P3	179 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	RTL3	Q8N8U3	475 aa	Known RBP	4.64	□□□□□ -1.67
ATM-223	ENST00000533979	ZBTB44	Q8NCP5	570 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	C7orf57	Q8NEG2	295 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	ANKRD20A12P	Q8NF67	263 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	LPGAT1	Q92604	370 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	ARSG	Q96EG1	525 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	CEP295NL	Q96MC4	621 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	ZNF830	Q96NB3	372 aa	Predicted RBP	4.64	□□□□□ -1.67
ATM-223	ENST00000533979	NEK1	Q96PY6	1258 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	PRAM1	Q96QH2	718 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	SLC5A7	Q9GZV3	580 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	MAGEE1	Q9HCI5	957 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	OLAH	Q9NV23	265 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	ANO10	Q9NW15	660 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	MCM9	Q9NXL9	1143 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	HAO2	Q9NYQ3	351 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	CNIH4	Q9P003	139 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	NLK	Q9UBE8	527 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	CTNNAL1	Q9UBT7	734 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	IL19	Q9UHD0	177 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	LEF1	Q9UJU2	399 aa	Predicted RBP	4.64	□□□□□ -1.67
ATM-223	ENST00000533979	APPL1	Q9UKG1	709 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	FBXO4	Q9UKT5	387 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	WBP11	Q9Y2W2	641 aa	Known RBP	4.64	□□□□□ -1.67
ATM-223	ENST00000533979	AAR2	Q9Y312	384 aa	Known RBP	4.64	□□□□□ -1.67
ATM-223	ENST00000533979	NWD1	Q149M9	1564 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	4.64	□□□□□ -1.67
ATM-223	ENST00000533979	MSH6	P52701	1360 aa		4.64	□□□□□ -1.67
ATM-223	ENST00000533979	PLCH2	O75038	1416 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	VWDE	Q8N2E2	1590 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979		A0A087WV48	116 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	FAM237A	A0A1B0GTK4	181 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	EDDM13	A0A1B0GTR0	161 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	HTR3E	A5X5Y0	456 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	KDM4E	B2RXH2	506 aa	Predicted RBP	4.63	□□□□□ -1.67
ATM-223	ENST00000533979	CBX6	O95503	412 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	CYP1A2	P05177	515 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	INHBA	P08476	426 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	SLC2A4	P14672	509 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	CTPS1	P17812	591 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	HOXA11	P31270	313 aa	Predicted RBP	4.63	□□□□□ -1.67
ATM-223	ENST00000533979	ZNF132	P52740	706 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	ARF5	P84085	180 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	HTD2	P86397	168 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	TFAP4	Q01664	338 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	LTB	Q06643	244 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	NPRL3	Q12980	569 aa		4.63	□□□□□ -1.67
ATM-223	ENST00000533979	PPIG	Q13427	754 aa	Known RBP eCLIP	4.63	□□□□□ -1.67

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