RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	AGAP14	A8MT82	685 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	CDC7	O00311	574 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	DNAJB5	O75953	348 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	FGF1	P05230	155 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	TFPT	P0C1Z6	253 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	ITGAM	P11215	1152 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	BMP1	P13497	986 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	HLA-DPA1	P20036	260 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	SAT1	P21673	171 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	EEF1D	P29692	281 aa	Known RBP	4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	SLC6A4	P31645	630 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	RYK	P34925	604 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	TGFBR2	P37173	567 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	GPR15	P49685	360 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	POLR2J	P52435	117 aa	Known RBP	4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	FAM189B	P81408	668 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	CCL14	Q16627	93 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	CAPN13	Q6MZZ7	669 aa	Predicted RBP	4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	TAF2	Q6P1X5	1199 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	GPR149	Q86SP6	731 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	CLVS1	Q8IUQ0	354 aa	Predicted RBP	4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	OFCC1	Q8IZS5	231 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	CARNMT1	Q8N4J0	409 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	KIAA1958	Q8N8K9	716 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	FAR1	Q8WVX9	515 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	TRIB2	Q92519	343 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	GTF2H4	Q92759	462 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	UROC1	Q96N76	676 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	SERPINB11	Q96P15	392 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	ALPK1	Q96QP1	1244 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	ZNF300	Q96RE9	604 aa	Predicted RBP	4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	CLSTN3	Q9BQT9	956 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	NXF2	Q9GZY0	626 aa	Known RBP	4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	MID1IP1	Q9NPA3	183 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	IRAK4	Q9NWZ3	460 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	DSE	Q9UL01	958 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	BLOC1S6	Q9UL45	172 aa		4.37	□□□□□ -1.71
CTSC-208	ENST00000533897	TRBV5-4	A0A0C4DH59	114 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	BOLA2-SMG1P6	H3BVE0	249 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	CLOCK	O15516	846 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	GREM1	O60565	184 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	DPM1	O60762	260 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	PSMA4	P25789	261 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	HOXA9	P31269	272 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	ACVRL1	P37023	503 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	MAPKAPK2	P49137	400 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	TRIP4	Q15650	581 aa	Predicted RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	PLA2G4E	Q3MJ16	856 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	SLC2A7	Q6PXP3	512 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	LAYN	Q6UX15	382 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	TSEN54	Q7Z6J9	526 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	OR52B6	Q8NGF0	335 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	USP7	Q93009	1102 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	CHID1	Q9BWS9	393 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	PAIP1	Q9H074	479 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	DUSP21	Q9H596	190 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	CLMP	Q9H6B4	373 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	MAGIX	Q9H6Y5	334 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	ZFYVE28	Q9HCC9	887 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	LATS2	Q9NRM7	1088 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	STOML2	Q9UJZ1	356 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	ACTL7A	Q9Y615	435 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	PIKFYVE	Q9Y2I7	2098 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	TYW5	A2RUC4	315 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	CASTOR2	A6NHX0	329 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	IFRD1	O00458	451 aa	Predicted RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	ENPP3	O14638	875 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	SYNCRIP	O60506	623 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	CBFA2T3	O75081	653 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	BAIAP3	O94812	1187 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	UGT1A1	P22309	533 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	UGT1A4	P22310	534 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	UGT1A3	P35503	534 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	UGT1A5	P35504	534 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	HTR6	P50406	440 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	SFSWAP	Q12872	951 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	MAP2K5	Q13163	448 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	DAG1	Q14118	895 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	SKIV2L	Q15477	1246 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	TSN	Q15631	228 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	PFKFB4	Q16877	469 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	RUNDC3A	Q59EK9	446 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	PSAPL1	Q6NUJ1	521 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	NIPAL1	Q6NVV3	410 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	TXNDC11	Q6PKC3	985 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	CHST15	Q7LFX5	561 aa	Predicted RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	MICAL3	Q7RTP6	2002 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	IGFN1	Q86VF2	1251 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	CENPS	Q8N2Z9	138 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	OR4L1	Q8NH43	312 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	TMBIM1	Q969X1	311 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	ITPKC	Q96DU7	683 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	SH3YL1	Q96HL8	342 aa	Predicted RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	REXO5	Q96IC2	774 aa	Known RBP	4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	COX4I2	Q96KJ9	171 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	SPATA17	Q96L03	361 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	SMIM14	Q96QK8	99 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	PSKH2	Q96QS6	385 aa		4.36	□□□□□ -1.71
CTSC-208	ENST00000533897	FSD1L	Q9BXM9	530 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms