RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 LIPEQ05469 1076 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 SLC18A2Q05940 514 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 SGCGQ13326 291 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 FIBCD1Q8N539 461 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 ASB12Q8WXK4 309 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 SYT11Q9BT88 431 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 TRIM8Q9BZR9 551 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 ASF1AQ9Y294 204 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 RECQL5O94762 991 aaPredicted RBP12.11□□□□□ -0.47
BDNF-218ENST00000533246 ADSLP30566 484 aaPredicted RBP12.11□□□□□ -0.47
BDNF-218ENST00000533246 CDH5P33151 784 aaPredicted RBP12.11□□□□□ -0.47
BDNF-218ENST00000533246 NAE1Q13564 534 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 COL9A2Q14055 689 aaPredicted RBP12.11□□□□□ -0.47
BDNF-218ENST00000533246 TXNDC8Q6A555 127 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 KIAA0408Q6ZU52 694 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 ADHFE1Q8IWW8 467 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 C10orf53Q8N6V4 93 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 C7orf57Q8NEG2 295 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 ING5Q8WYH8 240 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 FCRL3Q96P31 734 aaPredicted RBP12.11□□□□□ -0.47
BDNF-218ENST00000533246 CERS4Q9HA82 394 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 MIOSQ9NXC5 875 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 CNOT6Q9ULM6 557 aaKnown RBP12.11□□□□□ -0.47
BDNF-218ENST00000533246 TNFRSF10AO00220 468 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 CCL16O15467 120 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 STK16O75716 305 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 IL32P24001 234 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 PRKCHP24723 683 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 CCT3P49368 545 aaKnown RBP12.11□□□□□ -0.47
BDNF-218ENST00000533246 MTPNP58546 118 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 PURAQ00577 322 aaKnown RBP12.11□□□□□ -0.47
BDNF-218ENST00000533246 ACAP2Q15057 778 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 CLPPQ16740 277 aaPredicted RBP12.11□□□□□ -0.47
BDNF-218ENST00000533246 ALFQ53S48 1182 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 OR8H2Q8N162 312 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 DEPDC4Q8N2C3 294 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 BRSK1Q8TDC3 778 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 NTAN1Q96AB6 310 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 EPB41L4BQ9H329 900 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 SP140LQ9H930 580 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 STK39Q9UEW8 545 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 FETUBQ9UGM5 382 aa12.11□□□□□ -0.47
BDNF-218ENST00000533246 SAMHD1Q9Y3Z3 626 aaKnown RBP12.11□□□□□ -0.47
BDNF-218ENST00000533246 TRBV23OR9-2A0A075B6M9 112 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 GLYATL1P3A0A0U1RQE8 302 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 A0A1B0GVM2 712 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 TCAF2A6NFQ2 919 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 H3BSA7 217 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 TP73O15350 636 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 PABPC4LP0CB38 370 aaKnown RBP12.1□□□□□ -0.47
BDNF-218ENST00000533246 MTHFD1P11586 935 aaKnown RBP12.1□□□□□ -0.47
BDNF-218ENST00000533246 CDK4P11802 303 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 RPIAP49247 311 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 ARL4DP49703 201 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 GNG2P59768 71 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 OLR1P78380 273 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 FAPQ12884 760 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 LCP2Q13094 533 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 OGFOD2Q6N063 350 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 ARFGAP1Q8N6T3 406 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 LRRC20Q8TCA0 184 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 CDKN2AIPNLQ96HQ2 116 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 FEM1CQ96JP0 617 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 BRD9Q9H8M2 597 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 SLC35C2Q9NQQ7 365 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 OXSMQ9NWU1 459 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 VPS4AQ9UN37 437 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 MYO10Q9HD67 2058 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 K7EPI3 171 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 PIRO00625 290 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 SLC7A4O43246 635 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 PABPC1P11940 636 aaKnown RBP12.1□□□□□ -0.47
BDNF-218ENST00000533246 MAGP20916 626 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 GDF5P43026 501 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 GNPDA1P46926 289 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 YAP1P46937 504 aaKnown RBP12.1□□□□□ -0.47
BDNF-218ENST00000533246 STT3AP46977 705 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 POLR2JP52435 117 aaKnown RBP12.1□□□□□ -0.47
BDNF-218ENST00000533246 RAB15P59190 212 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 VN1R5Q7Z5H4 357 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 SERPINA9Q86WD7 417 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 REXO5Q96IC2 774 aaKnown RBP12.1□□□□□ -0.47
BDNF-218ENST00000533246 BBS4Q96RK4 519 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 WRAP53Q9BUR4 548 aaKnown RBP12.1□□□□□ -0.47
BDNF-218ENST00000533246 TOR3AQ9H497 397 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 ADPRHL2Q9NX46 363 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 DNAJB4Q9UDY4 337 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 KCNE2Q9Y6J6 123 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 PHLPP1O60346 1717 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 NUP188Q5SRE5 1749 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 CDC7O00311 574 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 KPNA5O15131 536 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 FOXD2O60548 495 aaPredicted RBP12.1□□□□□ -0.47
BDNF-218ENST00000533246 EDNRBP24530 442 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 CENPAP49450 140 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 CYP4F8P98187 520 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 TRIP4Q15650 581 aaPredicted RBP12.1□□□□□ -0.47
BDNF-218ENST00000533246 REP15Q6BDI9 236 aa12.1□□□□□ -0.47
BDNF-218ENST00000533246 KIAA0930Q6ICG6 404 aaPredicted RBP12.1□□□□□ -0.47
BDNF-218ENST00000533246 OR10A6Q8NH74 314 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms