RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ZMYND15Q9H091 742 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 ETNK1Q9HBU6 452 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 FGF22Q9HCT0 170 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 MRPL40Q9NQ50 206 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 RAB6BQ9NRW1 208 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 ZDHHC18Q9NUE0 388 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 SPATS2LQ9NUQ6 558 aaKnown RBP11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 RBM22Q9NW64 420 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 ARGLU1Q9NWB6 273 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 TRHDEQ9UKU6 1024 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 PHTF1Q9UMS5 762 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 SLC5A6Q9Y289 635 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 COQ6Q9Y2Z9 468 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 RPS6KL1Q9Y6S9 549 aa11.2□□□□□ -0.62
TRAPPC4-213ENST00000533149 IGHV1OR21-1A0A087WYE8 117 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 TMEM202A6NGA9 273 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 TP73O15350 636 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 PRAMEF11O60813 436 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 SORBS2O94875 1100 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 CD160O95971 181 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 PDGFAP04085 211 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 FGF1P05230 155 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 HOXC4P09017 264 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 FAM153BP0C7A2 387 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 MPSTP25325 297 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 LEPRP48357 1165 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 PGDP52209 483 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 GPLD1P80108 840 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 IL10RBQ08334 325 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 MRPL49Q13405 166 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 ERV3-1Q14264 604 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 INPP5JQ15735 1006 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 FAM153CQ494X1 144 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 NADK2Q4G0N4 442 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 RNASEH2BQ5TBB1 312 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 HIBCHQ6NVY1 386 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 LEKR1Q6ZMV7 388 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 PCGF5Q86SE9 256 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 APLFQ8IW19 511 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 CNTD1Q8N815 330 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 CCL4L1Q8NHW4 92 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 FBXO25Q8TCJ0 367 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 HCAR2Q8TDS4 363 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 AENQ8WTP8 325 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 NSMCE1Q8WV22 266 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 CPT1BQ92523 772 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 FATE1Q969F0 183 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 TCTN2Q96GX1 697 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 GDAP1L1Q96MZ0 367 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 AGAP3Q96P47 875 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 CTRCQ99895 268 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 GSDMCQ9BYG8 508 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 FAM129AQ9BZQ8 928 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 SP110Q9HB58 689 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 KLHL8Q9P2G9 620 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 PDP2Q9P2J9 529 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 FAM153AQ9UHL3 310 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 HPCAL4Q9UM19 191 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 MRPS18BQ9Y676 258 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 OAS3Q9Y6K5 1087 aaKnown RBP11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 CHD5Q8TDI0 1954 aa11.19□□□□□ -0.62
TRAPPC4-213ENST00000533149 TCRBV7S3A2A0A539 114 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 NDC80O14777 642 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 DLGAP3O95886 979 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 RECKO95980 971 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 CSF2RBP32927 897 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 CD68P34810 354 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 DLSTP36957 453 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 FDFT1P37268 417 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 RENBPP51606 427 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 BASP1P80723 227 aaKnown RBP11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 SLC10A7Q0GE19 358 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 ILF3Q12906 894 aaKnown RBP eCLIP11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 MORF4L2Q15014 288 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 BEND6Q5SZJ8 279 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 MARC1Q5VT66 337 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 ANKRD22Q5VYY1 191 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 ERAP2Q6P179 960 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 PPIL6Q8IXY8 311 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 TEX26Q8N6G2 289 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 NAT8LQ8N9F0 302 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 MARVELD3Q96A59 401 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 FUBP1Q96AE4 644 aaKnown RBP11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 VOPP1Q96AW1 172 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 AHCYL2Q96HN2 611 aaKnown RBP11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 PWWP2AQ96N64 755 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 ZNF599Q96NL3 588 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 GLOD4Q9HC38 313 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 TAAR2Q9P1P5 351 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 MTRF1LQ9UGC7 380 aaKnown RBP11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 MOSPD1Q9UJG1 213 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 KCND3Q9UK17 655 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 ACTL7AQ9Y615 435 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 RP1L1Q8IWN7 2480 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 LRBAP50851 2863 aa11.18□□□□□ -0.62
TRAPPC4-213ENST00000533149 CDC14CA4D256 554 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 F5H423 210 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 POLR1CO15160 346 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 PPM1DO15297 605 aa11.17□□□□□ -0.62
TRAPPC4-213ENST00000533149 PSMB4P28070 264 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms