RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 SOX13Q9UN79 622 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 WDFY3Q8IZQ1 3526 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 MYLKQ15746 1914 aa12.76□□□□□ -0.37
TRAPPC4-212ENST00000533058 CCDC187A0A096LP49 1063 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 MAGEB16A2A368 324 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 A6NCN8 305 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 RHPN2P1A8MT19 583 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 TLX3O43711 291 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 BANF1O75531 89 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 MPOP05164 745 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZNF8P17098 575 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 PAMP19021 973 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 NMBRP28336 390 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 AKT1P31749 480 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 MAZP56270 477 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 GABREP78334 506 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 DHX9Q08211 1270 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 PDIA2Q13087 525 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 ATP13A5Q4VNC0 1218 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 AFTPHQ6ULP2 937 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 CENPUQ71F23 418 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 CHST15Q7LFX5 561 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 ADGRG6Q86SQ4 1221 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 CCDC25Q86WR0 208 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 COL27A1Q8IZC6 1860 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 LRRN4CLQ8ND94 238 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 TMEM159Q96B96 161 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZNF669Q96BR6 464 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 CFAP36Q96G28 342 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 PRR11Q96HE9 360 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 CDKN2AIPNLQ96HQ2 116 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZNF778Q96MU6 729 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 TTC25Q96NG3 672 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 SLC46A1Q96NT5 459 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 ARHGEF17Q96PE2 2063 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 KIFC1Q9BW19 673 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 MRM3Q9HC36 420 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 ASCL3Q9NQ33 180 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 FAM114A2Q9NRY5 505 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 SMOXQ9NWM0 555 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 GRHL1Q9NZI5 618 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 TMPRSS11EQ9UL52 423 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 PLEKHM1Q9Y4G2 1056 aa12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 PCYT1BQ9Y5K3 369 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-212ENST00000533058 KIR2DS5A0A0G2JLQ3 304 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 A0A0G2JNG1 304 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 A0A1W2PNU3 283 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 CCDC162PA2VCL2 907 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 OR51F1A6NGY5 319 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 PRR19A6NJB7 356 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 OR5K4A6NMS3 321 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 KIR2DS3K7RE56 304 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 KMOO15229 486 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 CASC3O15234 703 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 PPM1DO15297 605 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 GPR39O43194 453 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 B4GAT1O43505 415 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 KCNJ13O60928 360 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 MTX2O75431 263 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 CDK14O94921 469 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 CPNE6O95741 557 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 GOT2P00505 430 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 SLC2A4P14672 509 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 MAGEA3P43357 314 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 ARSDP51689 593 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 INHBCP55103 352 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 XIAPP98170 497 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 CACNG1Q06432 222 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 TMEM115Q12893 351 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 NFATC2Q13469 925 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 GTF2H3Q13889 308 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 KIR2DS5Q14953 304 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 TRADDQ15628 312 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZNF648Q5T619 568 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 IYDQ6PHW0 289 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 SNX20Q7Z614 316 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 ANKMY2Q8IV38 441 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 AVL9Q8NBF6 648 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 OR13J1Q8NGT2 312 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 ART4Q93070 314 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 ULK4Q96C45 1275 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 MFSD3Q96ES6 412 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 DCUN1D1Q96GG9 259 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 TTC1Q99614 292 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 DPYSL5Q9BPU6 564 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 TIMM29Q9BSF4 260 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 ZCCHC2Q9C0B9 1178 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 STRADBQ9C0K7 418 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 OR2AG1Q9H205 316 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 SARS2Q9NP81 518 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 SAYSD1Q9NPB0 183 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 THSD1Q9NS62 852 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 DMGDHQ9UI17 866 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 RIMKLBQ9ULI2 386 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 SATB2Q9UPW6 733 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 CHMP2BQ9UQN3 213 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 RPS6KL1Q9Y6S9 549 aa12.74□□□□□ -0.37
TRAPPC4-212ENST00000533058 FAM237BA0A1B0GVD1 139 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 CDRT15L2A8MXV6 281 aa12.73□□□□□ -0.37
TRAPPC4-212ENST00000533058 GAPDHSO14556 408 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms