RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 KIAA0408Q6ZU52 694 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 C11orf96Q7Z7L8 435 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 NRROSQ86YC3 692 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 DENND6AQ8IWF6 608 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 CFAP206Q8IYR0 622 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 C2CD4AQ8NCU7 369 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 OR2L2Q8NH16 312 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 GLMNQ92990 594 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 TSSK1BQ9BXA7 367 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 DPEP2Q9H4A9 486 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 SLC32A1Q9H598 525 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 ANKZF1Q9H8Y5 726 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 LRRC4CQ9HCJ2 640 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 FBXO6Q9NRD1 293 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 SPATS2LQ9NUQ6 558 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 TAAR2Q9P1P5 351 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 SLC23A2Q9UGH3 650 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 CDV3Q9UKY7 258 aaKnown RBP11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 KCNK6Q9Y257 313 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 DNAJC16Q9Y2G8 782 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 CRYL1Q9Y2S2 319 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 PCDHB1Q9Y5F3 818 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 PRSS21Q9Y6M0 314 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 OTOGLQ3ZCN5 2332 aa11.06□□□□□ -0.64
TRAPPC4-211ENST00000533012 PCDH15Q96QU1 1955 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 TCRBV9S1A1TA0A576 114 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 H3BMM5 538 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 TRIM38O00635 465 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 SNX2O60749 519 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 HAUS5O94927 633 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 ESR1P03372 595 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 GIMD1P0DJR0 217 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 RPS3P23396 243 aaKnown RBP eCLIP11.05□□□□□ -0.642e-8■■■■■ 45.7
TRAPPC4-211ENST00000533012 TNFRSF8P28908 595 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 PBLDP30039 288 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 STX2P32856 288 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 SLC1A2P43004 574 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 LEPRP48357 1165 aaKnown RBP11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 RPIAP49247 311 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 EIF3BP55884 814 aaKnown RBP11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 GPX6P59796 221 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 DMPKQ09013 629 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 ERCC6LQ2NKX8 1250 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 PLA2G4EQ3MJ16 856 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 C6orf132Q5T0Z8 1188 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 ZCCHC8Q6NZY4 707 aaKnown RBP11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 OGFOD3Q6PK18 319 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 NAXDQ8IW45 347 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 CNTN4Q8IWV2 1026 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 OR4C6Q8NH72 309 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 NAT14Q8WUY8 206 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 LPGAT1Q92604 370 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 CCDC97Q96F63 343 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 PANX3Q96QZ0 392 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 CDC6Q99741 560 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 P2RY12Q9H244 342 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 CCDC68Q9H2F9 335 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 OSGEPL1Q9H4B0 414 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 EVA1BQ9NVM1 165 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 NSMCE4AQ9NXX6 385 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 NCKIPSDQ9NZQ3 722 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 ZFATQ9P243 1243 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 GULP1Q9UBP9 304 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 GNPTGQ9UJJ9 305 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 ACSL5Q9ULC5 683 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 ST14Q9Y5Y6 855 aa11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 V9GYY5 206 aaPredicted RBP11.05□□□□□ -0.64
TRAPPC4-211ENST00000533012 OR5K4A6NMS3 321 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 SLC30A4O14863 429 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 KPNA5O15131 536 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 SIGLEC6O43699 453 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 TRIM16O95361 564 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 LDOC1O95751 146 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 AHSGP02765 367 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 PKMP14618 531 aaKnown RBP11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 CHRM3P20309 590 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 MPP1Q00013 466 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 ILF2Q12905 390 aaKnown RBP11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 BRD3Q15059 726 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 RSPO4Q2I0M5 234 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 MAP9Q49MG5 647 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 ZNF789Q5FWF6 425 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 METRNLQ641Q3 311 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 CNSTQ6PJW8 725 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 TRMT10CQ7L0Y3 403 aaKnown RBP11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 GALNT7Q86SF2 657 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 SLC26A11Q86WA9 606 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 FAM181AQ8N9Y4 354 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 HM13Q8TCT9 377 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 FBF1Q8TES7 1133 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 ZDHHC1Q8WTX9 485 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 CAMK1GQ96NX5 476 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 CDC42EP4Q9H3Q1 356 aaKnown RBP11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 NINJ2Q9NZG7 142 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 SIRPGQ9P1W8 387 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 TXNDC16Q9P2K2 825 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 FAM8A1Q9UBU6 413 aa11.04□□□□□ -0.64
TRAPPC4-211ENST00000533012 TBC1D29Q9UFV1 150 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms