RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 KCNMB2Q9Y691 235 aa16.75■□□□□ 0.27
RPUSD4-207ENST00000532800 IGHV5-51A0A0C4DH38 117 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 K7EM74 188 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 GAPDHSO14556 408 aaPredicted RBP16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 KATNA1O75449 491 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 FGF5P12034 268 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 NELFEP18615 380 aaKnown RBP16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 PBLDP30039 288 aaPredicted RBP16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 HALP42357 657 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 SLC1A1P43005 524 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 NR2C2P49116 596 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 NFE2L1Q14494 772 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 KCNAB1Q14722 419 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 SPOCD1Q6ZMY3 1216 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 GLT6D1Q7Z4J2 308 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 ZC3H18Q86VM9 953 aaKnown RBP16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 VSTM4Q8IW00 320 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 ZNF567Q8N184 647 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 IPMKQ8NFU5 416 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 BLOC1S5Q8TDH9 187 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 ZDHHC12Q96GR4 267 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 TTC25Q96NG3 672 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 TRABDQ9H4I3 376 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 KLHL8Q9P2G9 620 aaPredicted RBP16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 KCTD3Q9Y597 815 aa16.74■□□□□ 0.27
RPUSD4-207ENST00000532800 GLYATL1P3A0A0U1RQE8 302 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 GOLGA6L3A6NEY3 463 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 OR2AG2A6NM03 316 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 CBFA2T2O43439 604 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 POP7O75817 140 aaKnown RBP16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 FOLR1P15328 257 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 FECHP22830 423 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 SRSF1Q07955 248 aaKnown RBP eCLIP16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 DMPKQ09013 629 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 SEPT6Q14141 434 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 TFDP2Q14188 446 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 PTPRCAPQ14761 206 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 SLC1A5Q15758 541 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 RPE65Q16518 533 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 PPP2R5EQ16537 467 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 GPRC6AQ5T6X5 926 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 CERS6Q6ZMG9 384 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 BZW1Q7L1Q6 419 aaKnown RBP16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 AMZ2Q86W34 360 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 PPP1R3BQ86XI6 285 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 DDHD1Q8NEL9 900 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 BRSK1Q8TDC3 778 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 CT55Q8WUE5 264 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 NAT14Q8WUY8 206 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 RUFY1Q96T51 708 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 RAB33BQ9H082 229 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 PCDHB3Q9Y5E6 796 aa16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 CFAP20Q9Y6A4 193 aaKnown RBP16.73■□□□□ 0.27
RPUSD4-207ENST00000532800 CDC14CA4D256 554 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 PSTPIP1O43586 416 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 MARCKSL1P49006 195 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 TUBB3Q13509 450 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 DNASE1L3Q13609 305 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 TCEAL1Q15170 157 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 LDLRAP1Q5SW96 308 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 DUS1LQ6P1R4 473 aaKnown RBP16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 TMEM220Q6QAJ8 160 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 PID1Q7Z2X4 250 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 BEND7Q8N7W2 519 aaPredicted RBP16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 SIDT2Q8NBJ9 832 aaKnown RBP16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 SLC41A2Q96JW4 573 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 FCRL5Q96RD9 977 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 MAP3K3Q99759 626 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 ZCCHC2Q9C0B9 1178 aaKnown RBP16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 AKIRIN1Q9H9L7 192 aaPredicted RBP16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 LHX9Q9NQ69 397 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 SEMA5BQ9P283 1151 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 POLHQ9Y253 713 aa16.72■□□□□ 0.27
RPUSD4-207ENST00000532800 hCG_1818297A0A087WSY0 165 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 KCNJ13O60928 360 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 EPOP01588 193 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 TPM1P09493 284 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 EBLN1P0CF75 366 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 PLCL1Q15111 1095 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 ZDHHC20Q5W0Z9 365 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 PWWP2BQ6NUJ5 590 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 DET1Q7L5Y6 550 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 DTX3LQ8TDB6 740 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 UBXN4Q92575 508 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 P3H4Q92791 437 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 QKIQ96PU8 341 aaKnown RBP eCLIP16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 TWSG1Q9GZX9 223 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 C10orf88Q9H8K7 445 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 IMP3Q9NV31 184 aaKnown RBP16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 HACD3Q9P035 362 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 KCND3Q9UK17 655 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 RARRES3Q9UL19 164 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 PADI1Q9ULC6 663 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 INTUQ9ULD6 942 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 PLAAQ9Y263 795 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 PCDHGA6Q9Y5G7 932 aa16.71■□□□□ 0.27
RPUSD4-207ENST00000532800 LRRK2Q5S007 2527 aa16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 TNRC6AQ8NDV7 1962 aaKnown RBP16.7■□□□□ 0.26
RPUSD4-207ENST00000532800 MTSS1O43312 755 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms