RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 FRMD3A2A2Y4 597 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 ZNF233A6NK53 670 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 C4orf47A7E2U8 309 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 K7EQS6 105 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 PCDH17O14917 1159 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 NPC1O15118 1278 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 CBFA2T3O75081 653 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 VIPP01282 170 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 HSP90AA1P07900 732 aaKnown RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 CD19P15391 556 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 WARSP23381 471 aaKnown RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 EIF2DP41214 584 aaKnown RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 DPP6P42658 865 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 DHPSP49366 369 aaPredicted RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 COPB1P53618 953 aaKnown RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 SLC7A9P82251 487 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 MRPS21P82921 87 aaKnown RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 LMAN2Q12907 356 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 TBX2Q13207 712 aaPredicted RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 ATP1A4Q13733 1029 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 BYSLQ13895 437 aaKnown RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 ACOX1Q15067 660 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 CCDC142Q17RM4 750 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 TBC1D25Q3MII6 688 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 ZACNQ401N2 412 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 LPCAT2Q7L5N7 544 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 TTC30AQ86WT1 665 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 RASGRP3Q8IV61 690 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 CACNA2D3Q8IZS8 1091 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 SLITRK1Q96PX8 696 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 WDR24Q96S15 920 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 MMS19Q96T76 1030 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 TMEM120AQ9BXJ8 343 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 CIPCQ9C0C6 399 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 LINC00597Q9H2U6 94 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 SNX25Q9H3E2 840 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 BCCIPQ9P287 314 aaKnown RBP eCLIP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 FBXO2Q9UK22 296 aaPredicted RBP5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 MMP17Q9ULZ9 603 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 VPS4AQ9UN37 437 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 DTNAQ9Y4J8 743 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 CLIC4Q9Y696 253 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 BPTFQ12830 3046 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 IGSF10Q6WRI0 2623 aa5.28□□□□□ -1.56
AMBRA1-209ENST00000529963 ASXL3Q9C0F0 2248 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 DENND4CQ5VZ89 1909 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 ZNF840PA6NDX5 716 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 LRRC3CA6NJW4 275 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 F8VP50 259 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 SUV39H1O43463 412 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 DNPH1O43598 174 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 HCRTO43612 131 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 ATP2C2O75185 946 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 C1QL1O75973 258 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 TJP3O95049 919 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 KAT7O95251 611 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 AGR2O95994 175 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 APODP05090 189 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 NHLRC4P0CG21 123 aaPredicted RBP5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 DHRS4L1P0CG22 281 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 CEACAM1P13688 526 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 CSRP1P21291 193 aaKnown RBP5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 BCKDHBP21953 392 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 LMO2P25791 158 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 SLC5A2P31639 672 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 RDXP35241 583 aaKnown RBP5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 GNL1P36915 607 aaPredicted RBP5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 OPRD1P41143 372 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 GEMIN4P57678 1058 aaKnown RBP5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 TNNC1P63316 161 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 NOP14P78316 857 aaKnown RBP5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 CEBPZQ03701 1054 aaKnown RBP5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 MDH1BQ5I0G3 518 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 EOGTQ5NDL2 527 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 RFX8Q6ZV50 586 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 TRAPPC11Q7Z392 1133 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 TRMT11Q7Z4G4 463 aaKnown RBP5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 WDR49Q8IV35 697 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 OR5B17Q8NGF7 314 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 OR1N1Q8NGS0 311 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 PIGKQ92643 395 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 SKA1Q96BD8 255 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 PCED1BQ96HM7 432 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 FNBP1Q96RU3 617 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 TIMP4Q99727 224 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 HNRNPABQ99729 332 aaKnown RBP5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 THAP7Q9BT49 309 aaPredicted RBP5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 NUSAP1Q9BXS6 441 aaKnown RBP5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 FGFBP2Q9BYJ0 223 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 ELOVL4Q9GZR5 314 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 SLC32A1Q9H598 525 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 SAP30LQ9HAJ7 183 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 USP29Q9HBJ7 922 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 TMEM8AQ9HCN3 771 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 RRN3Q9NYV6 651 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 TBC1D14Q9P2M4 693 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 SERGEFQ9UGK8 458 aa5.27□□□□□ -1.57
AMBRA1-209ENST00000529963 NEUROG3Q9Y4Z2 214 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms