RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 FAM198BQ6UWH4 519 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 IGFL2Q6UWQ7 119 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 RPTNQ6XPR3 784 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 CERS6Q6ZMG9 384 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 SPOCD1Q6ZMY3 1216 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 MRGPREQ86SM8 312 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 ADGRG6Q86SQ4 1221 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 LRRTM4Q86VH4 590 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 SYTL1Q8IYJ3 562 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 TEX26Q8N6G2 289 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 CCHCR1Q8TD31 782 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 ZFPM2Q8WW38 1151 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 NACC2Q96BF6 587 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 FANCEQ9HB96 536 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 ATP13A2Q9NQ11 1180 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 PCMTD2Q9NV79 361 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 SUCOQ9UBS9 1254 aaKnown RBP11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 NOVA2Q9UNW9 492 aaKnown RBP11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 BTRCQ9Y297 605 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 DCHS2Q6V1P9 2916 aa11.36□□□□□ -0.59
AMBRA1-207ENST00000529553 C9J4A7 227 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 PRICKLE3O43900 615 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 HBQ1P09105 142 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 VCLP18206 1134 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 RPL10P27635 214 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 HALP42357 657 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 MAXP61244 160 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 OTUD4Q01804 1114 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 DPYSQ14117 519 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 SEPT7Q16181 437 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 CA9Q16790 459 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 CLEC16AQ2KHT3 1053 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 ANKRD20A8PQ5CZ79 823 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 FAM69BQ5VUD6 431 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 RPUSD3Q6P087 351 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 MRGPRGQ86SM5 289 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 LRRC49Q8IUZ0 686 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 DNAJB14Q8TBM8 379 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 C14orf79Q96F83 325 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 MCEEQ96PE7 176 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 TRAPPC9Q96Q05 1148 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 SMIM14Q96QK8 99 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 KCTD15Q96SI1 283 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 ZSCAN5AQ9BUG6 496 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 ACTR5Q9H9F9 607 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 ZBTB20Q9HC78 741 aaPredicted RBP11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 GPATCH2LQ9NWQ4 482 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 HRASLS2Q9NWW9 162 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 GTF3C3Q9Y5Q9 886 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 NAV3Q8IVL0 2385 aa11.35□□□□□ -0.59
AMBRA1-207ENST00000529553 OR5K3A6NET4 321 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 DIAPH2O60879 1101 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 JRKO75564 520 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 FAM155BO75949 473 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 PRLP01236 227 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 AGAP20933 346 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 AGXTP21549 392 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 CA4P22748 312 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 OTX2P32243 289 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 ZNF169Q14929 603 aaPredicted RBP11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 ASIC2Q16515 512 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 ZNF569Q5MCW4 686 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 ALG1LQ6GMV1 187 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 DCUN1D2Q6PH85 259 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 XKRXQ6PP77 449 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 MON1BQ7L1V2 547 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 CDH24Q86UP0 819 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 BCORP1Q8N888 145 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 TEKT4Q8WW24 435 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 PCDHB18PQ96TA0 734 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 XPO4Q9C0E2 1151 aaKnown RBP11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 POLR1EQ9GZS1 481 aaKnown RBP11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 ZWILCHQ9H900 591 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 RAD18Q9NS91 495 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 P4HTMQ9NXG6 502 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 CWC15Q9P013 229 aaKnown RBP11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 SERTAD3Q9UJW9 196 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 DNAJC16Q9Y2G8 782 aa11.34□□□□□ -0.59
AMBRA1-207ENST00000529553 C1orf232A0A0U1RR37 186 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 SLC9B1P1A6NJY1 282 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 KCNN4O15554 427 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 GFPT2O94808 682 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 CDK14O94921 469 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 SNRPB2P08579 225 aaKnown RBP11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 DRG2P55039 364 aaKnown RBP11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 ABRQ12979 859 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 CDC16Q13042 620 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 AIMP2Q13155 320 aaKnown RBP11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 TLR1Q15399 786 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 PPP6R3Q5H9R7 873 aaPredicted RBP11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 PRAMEF17Q5VTA0 474 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 CRTC3Q6UUV7 619 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 FAM180AQ6UWF9 173 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 ZNF547Q8IVP9 402 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 TRAM1L1Q8N609 369 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 GLYATL1Q969I3 302 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 TUBGCP2Q9BSJ2 902 aa11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 SNRNP25Q9BV90 132 aaKnown RBP11.33□□□□□ -0.6
AMBRA1-207ENST00000529553 SPATA16Q9BXB7 569 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms