RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CPNE6O95741 557 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 FGF3P11487 239 aaPredicted RBP10.8□□□□□ -0.68
NEDD8-204ENST00000526430 CA5AP35218 305 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 FDFT1P37268 417 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 LIG3P49916 1009 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 HK3P52790 923 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 GPS1Q13098 491 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 AGERQ15109 404 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 WHAMMP3Q1A5X7 153 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 PIM3Q86V86 326 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 SLC25A41Q8N5S1 370 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 NAT8LQ8N9F0 302 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 Q8N9G6 341 aaPredicted RBP10.8□□□□□ -0.68
NEDD8-204ENST00000526430 NOA1Q8NC60 698 aaKnown RBP10.8□□□□□ -0.68
NEDD8-204ENST00000526430 PMEPA1Q969W9 287 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 TRIM51Q9BSJ1 452 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 WRAP53Q9BUR4 548 aaKnown RBP10.8□□□□□ -0.68
NEDD8-204ENST00000526430 ASPSCR1Q9BZE9 553 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 MBNL1Q9NR56 388 aaKnown RBP10.8□□□□□ -0.68
NEDD8-204ENST00000526430 PIH1D1Q9NWS0 290 aaKnown RBP10.8□□□□□ -0.68
NEDD8-204ENST00000526430 PILRAQ9UKJ1 303 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 MAP4K5Q9Y4K4 846 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 B3GALT1Q9Y5Z6 326 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 POLEQ07864 2286 aa10.8□□□□□ -0.68
NEDD8-204ENST00000526430 NIPBLQ6KC79 2804 aaeCLIP10.79□□□□□ -0.68
NEDD8-204ENST00000526430 GOLGA6L10A0A0M3HER8 536 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 HNRNPRO43390 633 aaKnown RBP10.79□□□□□ -0.68
NEDD8-204ENST00000526430 NUDT21O43809 227 aaKnown RBP10.79□□□□□ -0.68
NEDD8-204ENST00000526430 TMEM63AO94886 807 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 ECEL1O95672 775 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 TPH1P17752 444 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 PSMA3P25788 255 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 MAP4P27816 1152 aaKnown RBP10.79□□□□□ -0.68
NEDD8-204ENST00000526430 VIPR1P32241 457 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 IGFALSP35858 605 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 VPS41P49754 854 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 TRA2AQ13595 282 aaKnown RBP eCLIP10.79□□□□□ -0.68
NEDD8-204ENST00000526430 TUBB2AQ13885 445 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 PTPRCAPQ14761 206 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 WSCD2Q2TBF2 565 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 MAP9Q49MG5 647 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 RNASEH2BQ5TBB1 312 aaKnown RBP10.79□□□□□ -0.68
NEDD8-204ENST00000526430 LRRC66Q68CR7 880 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 OGFOD3Q6PK18 319 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 Q6ZVL8 140 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 GSTA5Q7RTV2 222 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 LYSMD3Q7Z3D4 306 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 CAND1Q86VP6 1230 aaKnown RBP10.79□□□□□ -0.68
NEDD8-204ENST00000526430 NLGN4XQ8N0W4 816 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 MMGT1Q8N4V1 131 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 CCDC89Q8N998 374 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 TP53I13Q8NBR0 393 aaPredicted RBP10.79□□□□□ -0.68
NEDD8-204ENST00000526430 NLGN4YQ8NFZ3 816 aaPredicted RBP10.79□□□□□ -0.68
NEDD8-204ENST00000526430 OR52K1Q8NGK4 314 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 STARD8Q92502 1023 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 TCTN2Q96GX1 697 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 TBL1YQ9BQ87 522 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 LRRC1Q9BTT6 524 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 TUBB2BQ9BVA1 445 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 SPRY4Q9C004 299 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 EIF2B3Q9NR50 452 aaKnown RBP10.79□□□□□ -0.68
NEDD8-204ENST00000526430 FEZ2Q9UHY8 353 aaPredicted RBP10.79□□□□□ -0.68
NEDD8-204ENST00000526430 CROCCQ5TZA2 2017 aa10.79□□□□□ -0.68
NEDD8-204ENST00000526430 ERI2A8K979 691 aaKnown RBP10.78□□□□□ -0.68
NEDD8-204ENST00000526430 GAPDHSO14556 408 aaPredicted RBP10.78□□□□□ -0.68
NEDD8-204ENST00000526430 PSMD3O43242 534 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 LDB2O43679 373 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 RECQL5O94762 991 aaPredicted RBP10.78□□□□□ -0.68
NEDD8-204ENST00000526430 RASGRP1O95267 797 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 SOD1P00441 154 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 APRTP07741 180 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 CTSEP14091 401 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 HLA-DPA1P20036 260 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 TPSB2P20231 275 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 ETV3P41162 512 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 MAGEA3P43357 314 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 STC1P52823 247 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 RAB15P59190 212 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 DR1Q01658 176 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 ABHD18Q0P651 414 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 ELP6Q0PNE2 266 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 CBLBQ13191 982 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 PRPSAP1Q14558 356 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 NAA30Q147X3 362 aaPredicted RBP10.78□□□□□ -0.68
NEDD8-204ENST00000526430 TPSAB1Q15661 275 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 DUPD1Q68J44 220 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 C4orf22Q6V702 233 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 PLA2G15Q8NCC3 412 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 MCUQ8NE86 351 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 ART4Q93070 314 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 POM121Q96HA1 1249 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 TEFMQ96QE5 360 aaKnown RBP10.78□□□□□ -0.68
NEDD8-204ENST00000526430 AGAP2Q99490 1192 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 FERMT1Q9BQL6 677 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 ADGRE3Q9BY15 652 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 LRRC40Q9H9A6 602 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 HAUS2Q9NVX0 235 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 GRHL1Q9NZI5 618 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 IL17CQ9P0M4 197 aa10.78□□□□□ -0.68
NEDD8-204ENST00000526430 LRIT1Q9P2V4 623 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms