RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 INSCQ1MX18 579 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 RSPO4Q2I0M5 234 aaPredicted RBP20.42■□□□□ 0.86
CD44-222ENST00000526025 DEFB133Q30KQ1 61 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 HSP90AA5PQ58FG0 334 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 HP1BP3Q5SSJ5 553 aaPredicted RBP20.42■□□□□ 0.86
CD44-222ENST00000526025 WASH2PQ6VEQ5 465 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 DET1Q7L5Y6 550 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 GLRX5Q86SX6 157 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 PALM2Q8IXS6 379 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 EID2Q8N6I1 236 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 OR2L2Q8NH16 312 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 SETD7Q8WTS6 366 aaKnown RBP20.42■□□□□ 0.86
CD44-222ENST00000526025 LPGAT1Q92604 370 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 GLMNQ92990 594 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 CCDC97Q96F63 343 aaPredicted RBP20.42■□□□□ 0.86
CD44-222ENST00000526025 P2RY12Q9H244 342 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 SLC32A1Q9H598 525 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 WASH6PQ9NQA3 447 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 EVA1BQ9NVM1 165 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 DLL3Q9NYJ7 618 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 PRKAB1Q9Y478 270 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 PCDHB1Q9Y5F3 818 aa20.42■□□□□ 0.86
CD44-222ENST00000526025 CFAP54Q96N23 3096 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 H3BMM5 538 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 SIGLEC6O43699 453 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 OR1I1O60431 355 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 S1PR4O95977 384 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 FTH1P02794 183 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 ESR1P03372 595 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 AK4P27144 223 aaPredicted RBP20.41■□□□□ 0.86
CD44-222ENST00000526025 SLC1A2P43004 574 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 ILF2Q12905 390 aaKnown RBP20.41■□□□□ 0.86
CD44-222ENST00000526025 PROX2Q3B8N5 592 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 AGAP9Q5VTM2 703 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 CCDC25Q86WR0 208 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 CLDN19Q8N6F1 224 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 ARL10Q8N8L6 244 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 C2CD4AQ8NCU7 369 aaPredicted RBP20.41■□□□□ 0.86
CD44-222ENST00000526025 HM13Q8TCT9 377 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.41■□□□□ 0.86
CD44-222ENST00000526025 CCM2Q9BSQ5 444 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 TSSK1BQ9BXA7 367 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 KLC4Q9NSK0 619 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 IL1RAPL1Q9NZN1 696 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 SLC23A2Q9UGH3 650 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 GNPTGQ9UJJ9 305 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 FBXO5Q9UKT4 447 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 PLEKHM1Q9Y4G2 1056 aa20.41■□□□□ 0.86
CD44-222ENST00000526025 A6NCN8 305 aa20.4■□□□□ 0.86
CD44-222ENST00000526025 ERVK-10P10266 1014 aa20.4■□□□□ 0.86
CD44-222ENST00000526025 SLC2A4P14672 509 aa20.4■□□□□ 0.86
CD44-222ENST00000526025 RPIAP49247 311 aa20.4■□□□□ 0.86
CD44-222ENST00000526025 MGAT5Q09328 741 aa20.4■□□□□ 0.86
CD44-222ENST00000526025 ZNF658BQ4V348 819 aaPredicted RBP20.4■□□□□ 0.86
CD44-222ENST00000526025 SLC30A9Q6PML9 568 aa20.4■□□□□ 0.86
CD44-222ENST00000526025 LDB1Q86U70 411 aaPredicted RBP20.4■□□□□ 0.86
CD44-222ENST00000526025 C17orf82Q86X59 251 aaPredicted RBP20.4■□□□□ 0.86
CD44-222ENST00000526025 UNC5BQ8IZJ1 945 aa20.4■□□□□ 0.86
CD44-222ENST00000526025 FAM46DQ8NEK8 389 aa20.4■□□□□ 0.86
CD44-222ENST00000526025 GPR156Q8NFN8 814 aa20.4■□□□□ 0.86
CD44-222ENST00000526025 IARS2Q9NSE4 1012 aaKnown RBP20.4■□□□□ 0.86
CD44-222ENST00000526025 FTSJ1Q9UET6 329 aa20.4■□□□□ 0.86
CD44-222ENST00000526025 KCNK6Q9Y257 313 aa20.4■□□□□ 0.86
CD44-222ENST00000526025 COMMD10Q9Y6G5 202 aa20.4■□□□□ 0.86
CD44-222ENST00000526025 PRSS21Q9Y6M0 314 aa20.4■□□□□ 0.86
CD44-222ENST00000526025 OR5K4A6NMS3 321 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 LDOC1O95751 146 aaPredicted RBP20.39■□□□□ 0.85
CD44-222ENST00000526025 CEACAM1P13688 526 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 IDSP22304 550 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 LEPRP48357 1165 aaKnown RBP20.39■□□□□ 0.85
CD44-222ENST00000526025 SLMAPQ14BN4 828 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 TEDDM1Q5T9Z0 273 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 METRNLQ641Q3 311 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 TRMT10BQ6PF06 316 aaKnown RBP20.39■□□□□ 0.85
CD44-222ENST00000526025 DENND6AQ8IWF6 608 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 BEND7Q8N7W2 519 aaPredicted RBP20.39■□□□□ 0.85
CD44-222ENST00000526025 AVL9Q8NBF6 648 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 C9orf72Q96LT7 481 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 BIRC8Q96P09 236 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 SPATS2LQ9NUQ6 558 aaKnown RBP20.39■□□□□ 0.85
CD44-222ENST00000526025 NSMCE4AQ9NXX6 385 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 GULP1Q9UBP9 304 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 ACSL5Q9ULC5 683 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 NFU1Q9UMS0 254 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 SPTBN4Q9H254 2564 aa20.39■□□□□ 0.85
CD44-222ENST00000526025 TNFSF14O43557 240 aa20.38■□□□□ 0.85
CD44-222ENST00000526025 NOBOXO60393 691 aa20.38■□□□□ 0.85
CD44-222ENST00000526025 CKMT1AP12532 417 aa20.38■□□□□ 0.85
CD44-222ENST00000526025 F3P13726 295 aa20.38■□□□□ 0.85
CD44-222ENST00000526025 DUSP3P51452 185 aaPredicted RBP20.38■□□□□ 0.85
CD44-222ENST00000526025 GPX6P59796 221 aa20.38■□□□□ 0.85
CD44-222ENST00000526025 PLOD1Q02809 727 aaPredicted RBP20.38■□□□□ 0.85
CD44-222ENST00000526025 RPA4Q13156 261 aa20.38■□□□□ 0.85
CD44-222ENST00000526025 CTBP1Q13363 440 aa20.38■□□□□ 0.85
CD44-222ENST00000526025 PLA2G4EQ3MJ16 856 aa20.38■□□□□ 0.85
CD44-222ENST00000526025 ABRAXAS1Q6UWZ7 409 aa20.38■□□□□ 0.85
CD44-222ENST00000526025 C3orf62Q6ZUJ4 267 aa20.38■□□□□ 0.85
CD44-222ENST00000526025 SLC26A11Q86WA9 606 aa20.38■□□□□ 0.85
CD44-222ENST00000526025 PNPLA1Q8N8W4 532 aa20.38■□□□□ 0.85
CD44-222ENST00000526025 OR6C4Q8NGE1 309 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms