RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	NECAB2	Q7Z6G3	386 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	SYVN1	Q86TM6	617 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	OR2T12	Q8NG77	320 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	OR52E4	Q8NGH9	312 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	SP140L	Q9H930	580 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	RMI1	Q9H9A7	625 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	SMURF2	Q9HAU4	748 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	CATSPERZ	Q9NTU4	200 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	SPATA7	Q9P0W8	599 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	UXT	Q9UBK9	157 aa	Predicted RBP	10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	PCTP	Q9UKL6	214 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	GBF1	Q92538	1859 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	ISPD	A4D126	451 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141		M0QX08	132 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	SLC16A6	O15403	523 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	MSI1	O43347	362 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	ECI2	O75521	394 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	RPP40	O75818	363 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	PEX11B	O96011	259 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	NR4A1	P22736	598 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	STC1	P52823	247 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	MTPN	P58546	118 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	DSC2	Q02487	901 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	KCNJ8	Q15842	424 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	HIST2H2AC	Q16777	129 aa	Predicted RBP	10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	GPRIN3	Q6ZVF9	776 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	RBM23	Q86U06	439 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	P2RY8	Q86VZ1	359 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	UMODL1-AS1	Q8N2C9	162 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	ATP6V0D2	Q8N8Y2	350 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	ARRDC4	Q8NCT1	418 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	SETD9	Q8NE22	299 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	OR6Q1	Q8NGQ2	317 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	FAR1	Q8WVX9	515 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	GLMN	Q92990	594 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	MYLPF	Q96A32	169 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	SLC47A1	Q96FL8	570 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	CTRC	Q99895	268 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	HGH1	Q9BTY7	390 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	HERC2P3	Q9BVR0	1158 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	AGO3	Q9H9G7	860 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	DNMT3B	Q9UBC3	853 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	RIMKLB	Q9ULI2	386 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	ERVK-11	Q9UQG0	969 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	ATP11B	Q9Y2G3	1177 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	AP3M1	Q9Y2T2	418 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	POLR2A	P24928	1970 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	LOC285095	A0A1B0GVY8	99 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	PTGES3L	E9PB15	166 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	KLK8	O60259	260 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	RHOBTB1	O94844	696 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	NDST3	O95803	873 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	MMP2	P08253	660 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	HLA-DPA1	P20036	260 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	AGXT	P21549	392 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	MAX	P61244	160 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	EMX1	Q04741	257 aa	Predicted RBP	10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	CDC20	Q12834	499 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	DNASE1L3	Q13609	305 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	TSN	Q15631	228 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	TYSND1	Q2T9J0	566 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	PAGE2B	Q5JRK9	111 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	SPESP1	Q6UW49	350 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	LACC1	Q8IV20	430 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	OR2T11	Q8NH01	316 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	OR5K1	Q8NHB7	308 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	TRIB2	Q92519	343 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	FIG4	Q92562	907 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	CAMKK2	Q96RR4	588 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	C17orf80	Q9BSJ5	609 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	ASPSCR1	Q9BZE9	553 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	TRIT1	Q9H3H1	467 aa	Known RBP	10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	EPS8L2	Q9H6S3	715 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	ACTR8	Q9H981	624 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	SP110	Q9HB58	689 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	MPP6	Q9NZW5	540 aa		10.14	□□□□□ -0.79
SPIDR-225	ENST00000524141	MBLAC1	A4D2B0	266 aa	Predicted RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	TOR1B	O14657	336 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	HS6ST1	O60243	411 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	NOBOX	O60393	691 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	MYO1D	O94832	1006 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	FGF1	P05230	155 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ATXN1L	P0C7T5	689 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	BMP4	P12644	408 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	MSH3	P20585	1137 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	CD40LG	P29965	261 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	IFITM3	Q01628	133 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZNF792	Q3KQV3	632 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	PRSS48	Q7RTY5	328 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	NKAP	Q8N5F7	415 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	OR4L1	Q8NH43	312 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	FBLIM1	Q8WUP2	373 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	TMEM40	Q8WWA1	233 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	FUBP1	Q96AE4	644 aa	Known RBP	10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	TADA1	Q96BN2	335 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	ZNF382	Q96SR6	550 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	SH3GL1	Q99961	368 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	MAGIX	Q9H6Y5	334 aa		10.13	□□□□□ -0.79
SPIDR-225	ENST00000524141	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	10.13	□□□□□ -0.79

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