RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 TAS2R14Q9NYV8 317 aa4.57□□□□□ -1.68
HMGB1P1-201ENST00000522557 PCDHGA5Q9Y5G8 931 aa4.57□□□□□ -1.68
HMGB1P1-201ENST00000522557 FAM170AA1A519 330 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 C4orf47A7E2U8 309 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 ITM2AO43736 263 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 CH25HO95992 272 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 STX2P32856 288 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 RPL3P39023 403 aaKnown RBP4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 RAB28P51157 221 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 CLCNKAP51800 687 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 ZXDBP98169 803 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 PPARDQ03181 441 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 TROAPQ12815 778 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 SNAPC1Q16533 368 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 VWC2Q2TAL6 325 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 SLC36A4Q6YBV0 504 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 FAM47EQ6ZV65 393 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 ERN2Q76MJ5 926 aaKnown RBP4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 CCDC190Q86UF4 302 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 PALB2Q86YC2 1186 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 IQCF1Q8N6M8 205 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 PAPD5Q8NDF8 572 aaKnown RBP4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 MCUQ8NE86 351 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 KIF18AQ8NI77 898 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 WDR20Q8TBZ3 569 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 TEKT4Q8WW24 435 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 FAM162AQ96A26 154 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 HDAC11Q96DB2 347 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 ERLEC1Q96DZ1 483 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 SPACA9Q96E40 222 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 C16orf70Q9BSU1 422 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 DCLK3Q9C098 648 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 C2orf40Q9H1Z8 148 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 NOL11Q9H8H0 719 aaKnown RBP4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 EQTNQ9NQ60 294 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 MRGBPQ9NV56 204 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 DDX25Q9UHL0 483 aaKnown RBP4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 B3GALT5Q9Y2C3 310 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 PTGDR2Q9Y5Y4 395 aa4.56□□□□□ -1.68
HMGB1P1-201ENST00000522557 IGLV5-52A0A0A0MRZ9 124 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 EDDM13A0A1B0GTR0 161 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 A0A1W2PPQ1 181 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 OR2M5A3KFT3 312 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 SRRM3A6NNA2 597 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 J3QR06 171 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 PSMD14O00487 310 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 TBCAO75347 108 aaKnown RBP4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 CELF2O95319 508 aaKnown RBP4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 TRUB2O95900 331 aaKnown RBP4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 VDRP11473 427 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 VPREB1P12018 145 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 S1PR1P21453 382 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 EGR4Q05215 589 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 PPIGQ13427 754 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 CAMK2DQ13557 499 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 NFATC4Q14934 902 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 FSCBQ5H9T9 825 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 ARMC4Q5T2S8 1044 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 CENPVQ7Z7K6 275 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 IQCHQ86VS3 1027 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 C1orf87Q8N0U7 546 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 AFAP1Q8N556 730 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 TBC1D16Q8TBP0 767 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 MAGEC3Q8TD91 643 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 MUS81Q96NY9 551 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 MS4A10Q96PG2 267 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 SLC25A33Q9BSK2 321 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 NUP85Q9BW27 656 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 ZWILCHQ9H900 591 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 CNOT10Q9H9A5 744 aaKnown RBP4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 PIH1D3Q9NQM4 214 aaKnown RBP4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 HIF1ANQ9NWT6 349 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 WWOXQ9NZC7 414 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 FZD10Q9ULW2 581 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 NME7Q9Y5B8 376 aa4.55□□□□□ -1.68
HMGB1P1-201ENST00000522557 ATXN2Q99700 1313 aaKnown RBP4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 TRIM77I1YAP6 450 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 DVL1O14640 695 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 CLGNO14967 610 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 ASAP2O43150 1006 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 PRAMEF11O60813 436 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 ZWINTO95229 277 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 ACAA1P09110 424 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 SRCP12931 536 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 CYP11B2P19099 503 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 ACHEP22303 614 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 ITGB8P26012 769 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 HOXD3P31249 432 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 CTNNA1P35221 906 aaKnown RBP4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 ENTPD1P49961 510 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 PPP2R2BQ00005 443 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 CDK3Q00526 305 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 LTBQ06643 244 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 RALGDSQ12967 914 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 DHX34Q14147 1143 aaKnown RBP4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 PTPRCAPQ14761 206 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 NR1D2Q14995 579 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 CTF1Q16619 201 aa4.54□□□□□ -1.68
HMGB1P1-201ENST00000522557 MEP1AQ16819 746 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms