RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 EXOC6BQ9Y2D4 811 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 YBX2Q9Y2T7 364 aaKnown RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 NOSIPQ9Y314 301 aaKnown RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 LSM4Q9Y4Z0 139 aaKnown RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 MAB21L2Q9Y586 359 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 ASTN2O75129 1339 aaPredicted RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 C15orf38-AP3S2A0A0A6YYH1 394 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 A1L4Q6 167 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 HNRNPCL2B2RXH8 293 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 MCIDASD6RGH6 385 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 HS3ST1O14792 307 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 ATP2A1O14983 1001 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 SPOPO43791 374 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 LANCL1O43813 399 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 FCGR3BO75015 233 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 JRKO75564 520 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 INHBBP09529 407 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 HSPA8P11142 646 aaKnown RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 UGT1A6P19224 532 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 EEF1B2P24534 225 aaKnown RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 ITGB8P26012 769 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 PSMB4P28070 264 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 PKLRP30613 574 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 STAT6P42226 847 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 JAK3P52333 1124 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 HNRNPFP52597 415 aaKnown RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 HSD11B2P80365 405 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 MRPS34P82930 218 aaKnown RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 TXNL4AP83876 142 aaKnown RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 FOLH1Q04609 750 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 SPOCK1Q08629 439 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 HSPB3Q12988 150 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 HLXQ14774 488 aaPredicted RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 STK11Q15831 433 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 FAM98BQ52LJ0 330 aaKnown RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 ARL13AQ5H913 290 aaPredicted RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 RABL3Q5HYI8 236 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 RANBP10Q6VN20 620 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 Q6ZUG5 572 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 MICALCLQ6ZW33 695 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 ATG9AQ7Z3C6 839 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 BNIPLQ7Z465 357 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 MDGA2Q7Z553 956 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 SPRED2Q7Z698 418 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 TBC1D26Q86UD7 250 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 HAPLN4Q86UW8 402 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 SYT12Q8IV01 421 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 PSTKQ8IV42 348 aaKnown RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 FOXP4Q8IVH2 680 aaPredicted RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 ZDHHC23Q8IYP9 409 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 ABI1Q8IZP0 508 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 TTC5Q8N0Z6 440 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 ZNF808Q8N4W9 903 aaPredicted RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 EXD3Q8N9H8 876 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 OR2T3Q8NH03 318 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 SLC20A1Q8WUM9 679 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 SNX19Q92543 992 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 IGSF8Q969P0 613 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 AZIN2Q96A70 460 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 TPD52L3Q96J77 140 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 FAM81BQ96LP2 452 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 ZNF512Q96ME7 567 aaPredicted RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 NUDCD1Q96RS6 583 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 CINPQ9BW66 212 aaPredicted RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 B3GNT4Q9C0J1 378 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 EGLN1Q9GZT9 426 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 THAP2Q9H0W7 228 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 FN3KQ9H479 309 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 KCNMB3Q9NPA1 279 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 RAB20Q9NX57 234 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 SLCO1C1Q9NYB5 712 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 CNOT11Q9UKZ1 510 aaKnown RBP3.97□□□□□ -1.77
SKP1-209ENST00000522552 PLA2G4CQ9UP65 541 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 CARD8Q9Y2G2 431 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 CEPT1Q9Y6K0 416 aa3.97□□□□□ -1.77
SKP1-209ENST00000522552 NCAPD2Q15021 1401 aa3.96□□□□□ -1.77
SKP1-209ENST00000522552 PRAMEF33A0A0G2JMD5 474 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 SERTM2A0A1B0GWG4 89 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 TCRBV7S3A2A0A539 114 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 ANKDD1BA6NHY2 528 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 CHADO15335 359 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 POLR2DO15514 142 aaKnown RBP3.96□□□□□ -1.78
SKP1-209ENST00000522552 MED7O43513 233 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 TLX2O43763 284 aaPredicted RBP3.96□□□□□ -1.78
SKP1-209ENST00000522552 PRAMEF10O60809 474 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 ATG13O75143 517 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 CNTN5O94779 1100 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 ZNF202O95125 648 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 ZFPL1O95159 310 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 PGLSO95336 258 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 CH25HO95992 272 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 CXCL10P02778 98 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 S100A9P06702 114 aaKnown RBP3.96□□□□□ -1.78
SKP1-209ENST00000522552 ANXA8P13928 327 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 CALB2P22676 271 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 PAX7P23759 505 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 ACAT1P24752 427 aaKnown RBP3.96□□□□□ -1.78
SKP1-209ENST00000522552 SLC6A6P31641 620 aa3.96□□□□□ -1.78
SKP1-209ENST00000522552 SHMT1P34896 483 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms