RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 LMX1AQ8TE12 382 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 SAP25Q8TEE9 199 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 ATXN7L3BQ96GX2 97 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 BIRC8Q96P09 236 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 TCF12Q99081 682 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 COPS8Q99627 209 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 LRRC61Q9BV99 259 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 UCKL1Q9NWZ5 548 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 NSMCE4AQ9NXX6 385 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 SPASTQ9UBP0 616 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 FETUBQ9UGM5 382 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 ZNHIT2Q9UHR6 403 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 CRYL1Q9Y2S2 319 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 MED16Q9Y2X0 877 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 PRKAB1Q9Y478 270 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 GPSM3Q9Y4H4 160 aa15.1■□□□□ 0.01
LSM1-203ENST00000520755 ZNF292O60281 2723 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 ASCC3Q8N3C0 2202 aaKnown RBP15.09■□□□□ 0.01
LSM1-203ENST00000520755 UBA6A0AVT1 1052 aaPredicted RBP15.09■□□□□ 0.01
LSM1-203ENST00000520755 FFAR2O15552 330 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 AQP9O43315 295 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 NUAK1O60285 661 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 PCDHGA12O60330 932 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 NDUFS3O75489 264 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 TCEA3O75764 348 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 SASH3O75995 380 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 CDK14O94921 469 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 CELA2BP08218 269 aaPredicted RBP15.09■□□□□ 0.01
LSM1-203ENST00000520755 RPS3P23396 243 aaKnown RBP eCLIP15.09■□□□□ 0.01
LSM1-203ENST00000520755 DGKAP23743 735 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 PMLP29590 882 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 CD151P48509 253 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 LIMK2P53671 638 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 EIF3BP55884 814 aaKnown RBP15.09■□□□□ 0.01
LSM1-203ENST00000520755 ARHGAP8P85298 464 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 TMEM115Q12893 351 aaPredicted RBP15.09■□□□□ 0.01
LSM1-203ENST00000520755 SUZ12Q15022 739 aaKnown RBP15.09■□□□□ 0.01
LSM1-203ENST00000520755 CRTC3Q6UUV7 619 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 SDCCAG8Q86SQ7 713 aaPredicted RBP15.09■□□□□ 0.01
LSM1-203ENST00000520755 NETO1Q8TDF5 533 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 VPS39Q96JC1 886 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 NDNQ99608 321 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 ZCCHC2Q9C0B9 1178 aaKnown RBP15.09■□□□□ 0.01
LSM1-203ENST00000520755 TMEM168Q9H0V1 697 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 RHOJQ9H4E5 214 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 CABIN1Q9Y6J0 2220 aa15.09■□□□□ 0.01
LSM1-203ENST00000520755 PRMT5O14744 637 aaPredicted RBP15.08■□□□□ 0
LSM1-203ENST00000520755 GRID2O43424 1007 aa15.08■□□□□ 0
LSM1-203ENST00000520755 VEGFDO43915 354 aa15.08■□□□□ 0
LSM1-203ENST00000520755 DNAJC6O75061 913 aa15.08■□□□□ 0
LSM1-203ENST00000520755 CD59P13987 128 aa15.08■□□□□ 0
LSM1-203ENST00000520755 NSG1P42857 185 aa15.08■□□□□ 0
LSM1-203ENST00000520755 SLCO1A2P46721 670 aa15.08■□□□□ 0
LSM1-203ENST00000520755 PGGT1BP53609 377 aa15.08■□□□□ 0
LSM1-203ENST00000520755 LIMK1P53667 647 aa15.08■□□□□ 0
LSM1-203ENST00000520755 ADARP55265 1226 aaKnown RBP15.08■□□□□ 0
LSM1-203ENST00000520755 TIAL1Q01085 375 aaKnown RBP eCLIP15.08■□□□□ 0
LSM1-203ENST00000520755 SLC14A1Q13336 389 aa15.08■□□□□ 0
LSM1-203ENST00000520755 BMPR2Q13873 1038 aa15.08■□□□□ 0
LSM1-203ENST00000520755 ELOCQ15369 112 aa15.08■□□□□ 0
LSM1-203ENST00000520755 PYCR3Q53H96 274 aa15.08■□□□□ 0
LSM1-203ENST00000520755 ADGRD1Q6QNK2 874 aa15.08■□□□□ 0
LSM1-203ENST00000520755 XKR5Q6UX68 686 aa15.08■□□□□ 0
LSM1-203ENST00000520755 DET1Q7L5Y6 550 aa15.08■□□□□ 0
LSM1-203ENST00000520755 ZNF547Q8IVP9 402 aa15.08■□□□□ 0
LSM1-203ENST00000520755 SLC25A45Q8N413 288 aa15.08■□□□□ 0
LSM1-203ENST00000520755 GABPB2Q8TAK5 448 aaPredicted RBP15.08■□□□□ 0
LSM1-203ENST00000520755 SETD7Q8WTS6 366 aaKnown RBP15.08■□□□□ 0
LSM1-203ENST00000520755 MZB1Q8WU39 189 aa15.08■□□□□ 0
LSM1-203ENST00000520755 ZBTB9Q96C00 473 aa15.08■□□□□ 0
LSM1-203ENST00000520755 DCUN1D1Q96GG9 259 aa15.08■□□□□ 0
LSM1-203ENST00000520755 SCARF2Q96GP6 870 aaPredicted RBP15.08■□□□□ 0
LSM1-203ENST00000520755 OR2M4Q96R27 311 aa15.08■□□□□ 0
LSM1-203ENST00000520755 GPR22Q99680 433 aa15.08■□□□□ 0
LSM1-203ENST00000520755 AARSD1Q9BTE6 412 aaKnown RBP15.08■□□□□ 0
LSM1-203ENST00000520755 TMEM109Q9BVC6 243 aa15.08■□□□□ 0
LSM1-203ENST00000520755 CLPBQ9H078 707 aa15.08■□□□□ 0
LSM1-203ENST00000520755 RMI1Q9H9A7 625 aa15.08■□□□□ 0
LSM1-203ENST00000520755 SLC24A2Q9UI40 661 aa15.08■□□□□ 0
LSM1-203ENST00000520755 ZNF180Q9UJW8 692 aa15.08■□□□□ 0
LSM1-203ENST00000520755 CDV3Q9UKY7 258 aaKnown RBP15.08■□□□□ 0
LSM1-203ENST00000520755 DOLKQ9UPQ8 538 aa15.08■□□□□ 0
LSM1-203ENST00000520755 MTO1Q9Y2Z2 717 aaKnown RBP15.08■□□□□ 0
LSM1-203ENST00000520755 PLEKHM1Q9Y4G2 1056 aa15.08■□□□□ 0
LSM1-203ENST00000520755 PCDHGB2Q9Y5G2 931 aa15.08■□□□□ 0
LSM1-203ENST00000520755 ARHGEF17Q96PE2 2063 aaPredicted RBP15.07■□□□□ 0
LSM1-203ENST00000520755 SMIM23A6NLE4 172 aa15.07■□□□□ 0
LSM1-203ENST00000520755 OR2AG2A6NM03 316 aa15.07■□□□□ 0
LSM1-203ENST00000520755 IQCF5A8MTL0 148 aa15.07■□□□□ 0
LSM1-203ENST00000520755 GPR89AB7ZAQ6 455 aa15.07■□□□□ 0
LSM1-203ENST00000520755 DYNC1I1O14576 645 aa15.07■□□□□ 0
LSM1-203ENST00000520755 CHUKO15111 745 aa15.07■□□□□ 0
LSM1-203ENST00000520755 NIPSNAP2O75323 286 aa15.07■□□□□ 0
LSM1-203ENST00000520755 INHBAP08476 426 aa15.07■□□□□ 0
LSM1-203ENST00000520755 ITGA2BP08514 1039 aa15.07■□□□□ 0
LSM1-203ENST00000520755 GPR89BP0CG08 455 aa15.07■□□□□ 0
LSM1-203ENST00000520755 RALBP11234 206 aa15.07■□□□□ 0
LSM1-203ENST00000520755 ATP1B2P14415 290 aaPredicted RBP15.07■□□□□ 0
LSM1-203ENST00000520755 ZNF7P17097 686 aaPredicted RBP15.07■□□□□ 0
LSM1-203ENST00000520755 FMO4P31512 558 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms