RNA–Protein interactions for RNA: ENST00000520672.2

PCDHA2-202, Transcript of protocadherin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHA2, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-202ENST00000520672 TLR6Q9Y2C9 796 aa13.72□□□□□ -0.21
PCDHA2-202ENST00000520672 A8MUA0 341 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 TMEM233B4DJY2 109 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 DYRK3O43781 588 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 TSPAN3O60637 253 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 SNX2O60749 519 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 EPN2O95208 641 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 GJB5O95377 273 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 TFEBP19484 476 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 CCNCP24863 283 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 SPCS2Q15005 226 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 PLCL1Q15111 1095 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 PARP8Q8N3A8 854 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 FBXO22Q8NEZ5 403 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 DOK1Q99704 481 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 NAT9Q9BTE0 207 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 BEGAINQ9BUH8 593 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 NMRAL1Q9HBL8 299 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 TLR8Q9NR97 1041 aaKnown RBP13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 TOR4AQ9NXH8 423 aa13.71□□□□□ -0.21
PCDHA2-202ENST00000520672 SYN3O14994 580 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 POLR1CO15160 346 aaPredicted RBP13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 MATN3O15232 486 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 RFPL2O75678 378 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 VNN2O95498 520 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 MT-CO1P00395 513 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 KRT6AP02538 564 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 KRT6BP04259 564 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 C2P06681 752 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 GSTM1P09488 218 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 GRIA4P48058 902 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 LSM3P62310 102 aaKnown RBP13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 TLE2Q04725 743 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 SNTA1Q13424 505 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 PTPRCAPQ14761 206 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 INSCQ1MX18 579 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 NPAS4Q8IUM7 802 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 PGAM4Q8N0Y7 254 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 FBXL20Q96IG2 436 aa13.71□□□□□ -0.22
PCDHA2-202ENST00000520672 AGRPO00253 132 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 RAD51BO15315 384 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 BCAS2O75934 225 aaPredicted RBP13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 CCDC159P0C7I6 412 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 HDCP19113 662 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 ALDH4A1P30038 563 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 SPRP35270 261 aaPredicted RBP13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 WNT3AP56704 352 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 ATP6V0D1P61421 351 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 TRIM25Q14258 630 aaKnown RBP13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 GRM3Q14832 879 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 PPP4R4Q6NUP7 873 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 TMEM135Q86UB9 458 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 ARMC8Q8IUR7 673 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 FUBP3Q96I24 572 aaKnown RBP eCLIP13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 SCYL1Q96KG9 808 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 VAT1Q99536 393 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 TTYH2Q9BSA4 534 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 ZYG11BQ9C0D3 744 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 IL22Q9GZX6 179 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 TASP1Q9H6P5 420 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 EFCAB1Q9HAE3 211 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 PAQR5Q9NXK6 330 aaPredicted RBP13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 MAU2Q9Y6X3 613 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 SCN5AQ14524 2016 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 VWA8A3KMH1 1905 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 A0A0D9SEW6 157 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 SOCS2O14508 198 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 FGF10O15520 208 aaPredicted RBP13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 ATF6P18850 670 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 POLR2IP36954 125 aaKnown RBP13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 RPL14P50914 215 aaKnown RBP13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 APLP1P51693 650 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 RPS24P62847 133 aaKnown RBP13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 TNK2Q07912 1038 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 EIF4EBP2Q13542 120 aaPredicted RBP13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 USP10Q14694 798 aaKnown RBP13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 TRIM60Q495X7 471 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 MARC1Q5VT66 337 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 DENND1CQ8IV53 801 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 VPS39Q96JC1 886 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 ACAT2Q9BWD1 397 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 BBS2Q9BXC9 721 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 SMOXQ9NWM0 555 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 PSME2Q9UL46 239 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 AAR2Q9Y312 384 aaKnown RBP13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 PMF1-BGLAPU3KQ54 211 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 ARPC4-TTLL3A0A0A6YYG9 625 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 ACOT8O14734 319 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 CASP3P42574 277 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 CBLBQ13191 982 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 GPR17Q13304 367 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 POLD3Q15054 466 aaPredicted RBP13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 MANEALQ5VSG8 457 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 GK5Q6ZS86 529 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 SPATC1Q76KD6 591 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 C16orf59Q7L2K0 433 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 HID1Q8IV36 788 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 SLC41A1Q8IVJ1 513 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 POC5Q8NA72 575 aa13.7□□□□□ -0.22
PCDHA2-202ENST00000520672 OR6P1Q8NGX9 317 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms