RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 STN1Q9H668 368 aaKnown RBP21.6■■□□□ 1.05
VEGFA-217ENST00000518538 VPS37BQ9H9H4 285 aa21.6■■□□□ 1.05
VEGFA-217ENST00000518538 CATSPERZQ9NTU4 200 aa21.6■■□□□ 1.05
VEGFA-217ENST00000518538 ANAPC5Q9UJX4 755 aa21.6■■□□□ 1.05
VEGFA-217ENST00000518538 SPEGQ15772 3267 aa21.6■■□□□ 1.05
VEGFA-217ENST00000518538 FAM187AA6NFU0 413 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 QSOX1O00391 747 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 ZW10O43264 779 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 URI1O94763 535 aaPredicted RBP21.59■■□□□ 1.05
VEGFA-217ENST00000518538 RPLP0P05388 317 aaKnown RBP21.59■■□□□ 1.05
VEGFA-217ENST00000518538 PAMP19021 973 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 ARNTP27540 789 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 RPL10P27635 214 aaKnown RBP21.59■■□□□ 1.05
VEGFA-217ENST00000518538 CCL7P80098 99 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 HHEXQ03014 270 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 SPIDRQ14159 915 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 NFE2L1Q14494 772 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 SEMA3AQ14563 771 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 SEPT7Q16181 437 aaKnown RBP21.59■■□□□ 1.05
VEGFA-217ENST00000518538 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.59■■□□□ 1.05
VEGFA-217ENST00000518538 METRNLQ641Q3 311 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 KIAA0930Q6ICG6 404 aaPredicted RBP21.59■■□□□ 1.05
VEGFA-217ENST00000518538 FAM83HQ6ZRV2 1179 aaPredicted RBP21.59■■□□□ 1.05
VEGFA-217ENST00000518538 MAATS1Q7Z4T9 603 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 MARCH9Q86YJ5 346 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 CLDN19Q8N6F1 224 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 ZNF592Q92610 1267 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 SNF8Q96H20 258 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 DEPDC7Q96QD5 511 aa21.59■■□□□ 1.05
VEGFA-217ENST00000518538 SCHIP1Q9P0W5 487 aaPredicted RBP21.59■■□□□ 1.05
VEGFA-217ENST00000518538 C17orf113A0A1B0GUU1 675 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 A0A1W2PQM1 296 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 EFCAB8A8MWE9 144 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 CD3EAPO15446 510 aaKnown RBP21.58■■□□□ 1.05
VEGFA-217ENST00000518538 SEC31AO94979 1220 aaKnown RBP21.58■■□□□ 1.05
VEGFA-217ENST00000518538 VAPBO95292 243 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 BRAFP15056 766 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 XRCC1P18887 633 aaPredicted RBP21.58■■□□□ 1.05
VEGFA-217ENST00000518538 DRG2P55039 364 aaKnown RBP21.58■■□□□ 1.05
VEGFA-217ENST00000518538 TARDBPQ13148 414 aaKnown RBP eCLIP21.58■■□□□ 1.05
VEGFA-217ENST00000518538 HIBCHQ6NVY1 386 aaPredicted RBP21.58■■□□□ 1.05
VEGFA-217ENST00000518538 RBM44Q6ZP01 1051 aaKnown RBP21.58■■□□□ 1.05
VEGFA-217ENST00000518538 TMEM135Q86UB9 458 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 AGGF1Q8N302 714 aaeCLIP21.58■■□□□ 1.05
VEGFA-217ENST00000518538 HM13Q8TCT9 377 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 SH3KBP1Q96B97 665 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 SIGLEC10Q96LC7 697 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 GFM1Q96RP9 751 aaKnown RBP21.58■■□□□ 1.05
VEGFA-217ENST00000518538 CCM2Q9BSQ5 444 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 TRIM31Q9BZY9 425 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 SYNDIG1Q9H7V2 258 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 MARCH4Q9P2E8 410 aaPredicted RBP21.58■■□□□ 1.05
VEGFA-217ENST00000518538 CPNE7Q9UBL6 633 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 WDR37Q9Y2I8 494 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 MAD1L1Q9Y6D9 718 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 PRSS21Q9Y6M0 314 aa21.58■■□□□ 1.05
VEGFA-217ENST00000518538 ASXL3Q9C0F0 2248 aa21.57■■□□□ 1.04
VEGFA-217ENST00000518538 NDC80O14777 642 aa21.57■■□□□ 1.04
VEGFA-217ENST00000518538 CASC3O15234 703 aaKnown RBP21.57■■□□□ 1.04
VEGFA-217ENST00000518538 GSTM1P09488 218 aa21.57■■□□□ 1.04
VEGFA-217ENST00000518538 ALDH4A1P30038 563 aa21.57■■□□□ 1.04
VEGFA-217ENST00000518538 HALP42357 657 aa21.57■■□□□ 1.04
VEGFA-217ENST00000518538 TTPAP49638 278 aa21.57■■□□□ 1.04
VEGFA-217ENST00000518538 UBE2IP63279 158 aaKnown RBP21.57■■□□□ 1.04
VEGFA-217ENST00000518538 GSTM4Q03013 218 aa21.57■■□□□ 1.04
VEGFA-217ENST00000518538 WHAMMP3Q1A5X7 153 aa21.57■■□□□ 1.04
VEGFA-217ENST00000518538 ANKRD20A4Q4UJ75 823 aa21.57■■□□□ 1.04
VEGFA-217ENST00000518538 DNAJC21Q5F1R6 531 aaKnown RBP21.57■■□□□ 1.04
VEGFA-217ENST00000518538 ZNF669Q96BR6 464 aaPredicted RBP21.57■■□□□ 1.04
VEGFA-217ENST00000518538 TRIM56Q9BRZ2 755 aaKnown RBP21.57■■□□□ 1.04
VEGFA-217ENST00000518538 ZNF624Q9P2J8 865 aaPredicted RBP21.57■■□□□ 1.04
VEGFA-217ENST00000518538 ACSL5Q9ULC5 683 aa21.57■■□□□ 1.04
VEGFA-217ENST00000518538 RPS6KL1Q9Y6S9 549 aa21.57■■□□□ 1.04
VEGFA-217ENST00000518538 RP1P56715 2156 aa21.57■■□□□ 1.04
VEGFA-217ENST00000518538 D6RAR5 112 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 F8W8V4 182 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 RAD51CO43502 376 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 B4GAT1O43505 415 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 OR1I1O60431 355 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 USP1O94782 785 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 SLC19A1P41440 591 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 ARCN1P48444 511 aaKnown RBP21.56■■□□□ 1.04
VEGFA-217ENST00000518538 ITGA8P53708 1063 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 OR1D5P58170 312 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 CAMK2BQ13554 666 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 CLCA4Q14CN2 919 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 ZNF658BQ4V348 819 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-217ENST00000518538 MRNIPQ6NTE8 343 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 XKR5Q6UX68 686 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 LDB1Q86U70 411 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-217ENST00000518538 TRIM48Q8IWZ4 208 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 GATA6Q92908 595 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 STAMBPL1Q96FJ0 436 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 FCRL3Q96P31 734 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-217ENST00000518538 SLC38A3Q99624 504 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 POT1Q9NUX5 634 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 FAM8A1Q9UBU6 413 aa21.56■■□□□ 1.04
VEGFA-217ENST00000518538 COL27A1Q8IZC6 1860 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-217ENST00000518538 ZCWPW2A0A1B0GU75 182 aa21.55■■□□□ 1.04
VEGFA-217ENST00000518538 OR52A4PA6NMU1 304 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms