RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 TMEM198Q66K66 360 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 SLC30A6Q6NXT4 461 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 PRSS57Q6UWY2 283 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 SATL1Q86VE3 508 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 CEP97Q8IW35 865 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 SCML4Q8N228 414 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 AFAP1Q8N556 730 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 METTL27Q8N6F8 245 aaPredicted RBP2.94□□□□□ -1.94
SKP1-203ENST00000517625 LSMEM1Q8N8F7 131 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 ZNF441Q8N8Z8 693 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 AVL9Q8NBF6 648 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 PPFIBP2Q8ND30 876 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 APPL2Q8NEU8 664 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 TSPAN14Q8NG11 270 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 OR10S1Q8NGN2 331 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 SLC20A1Q8WUM9 679 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 SLC44A1Q8WWI5 657 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 SORCS1Q8WY21 1168 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 TTC14Q96N46 770 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 PAFAH2Q99487 392 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 SLF1Q9BQI6 1058 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 LRMDAQ9H2I8 198 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 EVA1AQ9H8M9 152 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 CHMP1AQ9HD42 196 aaPredicted RBP2.94□□□□□ -1.94
SKP1-203ENST00000517625 TAS2R14Q9NYV8 317 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 LARSQ9P2J5 1176 aaKnown RBP2.94□□□□□ -1.94
SKP1-203ENST00000517625 TSPYL4Q9UJ04 414 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 HACL1Q9UJ83 578 aa2.94□□□□□ -1.94
SKP1-203ENST00000517625 PTRH2Q9Y3E5 179 aaKnown RBP2.94□□□□□ -1.94
SKP1-203ENST00000517625 CKAP5Q14008 2032 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 OR2M5A3KFT3 312 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 CTAGE9A4FU28 777 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 J3QR06 171 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 ADAMDEC1O15204 470 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 EIF3DO15371 548 aaKnown RBP eCLIP2.93□□□□□ -1.94
SKP1-203ENST00000517625 IPO8O15397 1037 aaKnown RBP2.93□□□□□ -1.94
SKP1-203ENST00000517625 ADAM20O43506 726 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 PLPP2O43688 288 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 GPR137BO60478 399 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 PLOD3O60568 738 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 LDB3O75112 727 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 KCNK5O95279 499 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 CTAGE8P0CG41 777 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 CSF2RAP15509 400 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 ITGA2P17301 1181 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 MCCP23508 829 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 AMPHP49418 695 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 PDLIM4P50479 330 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 SUOXP51687 545 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 IFI35P80217 286 aaPredicted RBP2.93□□□□□ -1.94
SKP1-203ENST00000517625 RUNX1T1Q06455 604 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 FAM98BQ52LJ0 330 aaKnown RBP2.93□□□□□ -1.94
SKP1-203ENST00000517625 ASPRV1Q53RT3 343 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 PACS1Q6VY07 963 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.93□□□□□ -1.943e-9■■□□□ 12.3
SKP1-203ENST00000517625 CLEC17AQ6ZS10 378 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 FOXL2NBQ6ZUU3 175 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 LDB1Q86U70 411 aaPredicted RBP2.93□□□□□ -1.94
SKP1-203ENST00000517625 TMPRSS12Q86WS5 348 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 LINC00346Q8IVM7 164 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 CTAGE4Q8IX94 777 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 ODF3L1Q8IXM7 274 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 DCP1BQ8IZD4 617 aaKnown RBP2.93□□□□□ -1.94
SKP1-203ENST00000517625 MAML2Q8IZL2 1156 aaPredicted RBP2.93□□□□□ -1.94
SKP1-203ENST00000517625 OR8H2Q8N162 312 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 NME8Q8N427 588 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 MOSPD2Q8NHP6 518 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 LPGAT1Q92604 370 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 TMCO6Q96DC7 493 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 SCRN2Q96FV2 425 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 NEUROD6Q96NK8 337 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 DGAT2Q96PD7 388 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 SLX1AQ9BQ83 275 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 APOL6Q9BWW8 343 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 ZNF556Q9HAH1 456 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 HHATLQ9HCP6 504 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 ABCF3Q9NUQ8 709 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 GDE1Q9NZC3 331 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 STK26Q9P289 416 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 ANAPC2Q9UJX6 822 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 OR2W1Q9Y3N9 320 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 PCDHGA5Q9Y5G8 931 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 FAM169AQ9Y6X4 670 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 PRAG1Q86YV5 1406 aa2.93□□□□□ -1.94
SKP1-203ENST00000517625 CACNA1IQ9P0X4 2223 aa2.92□□□□□ -1.94
SKP1-203ENST00000517625 A0A0G2JNG1 304 aa2.92□□□□□ -1.94
SKP1-203ENST00000517625 A8MV72 311 aaPredicted RBP2.92□□□□□ -1.94
SKP1-203ENST00000517625 TMEM178BH3BS89 294 aa2.92□□□□□ -1.94
SKP1-203ENST00000517625 TMEM189-UBE2V1I3L0A0 370 aa2.92□□□□□ -1.94
SKP1-203ENST00000517625 SYNGR3O43761 229 aa2.92□□□□□ -1.94
SKP1-203ENST00000517625 SSX4O60224 188 aa2.92□□□□□ -1.94
SKP1-203ENST00000517625 TSPAN1O60635 241 aa2.92□□□□□ -1.94
SKP1-203ENST00000517625 IGHV4-39P01824 125 aa2.92□□□□□ -1.94
SKP1-203ENST00000517625 AFPP02771 609 aaKnown RBP2.92□□□□□ -1.94
SKP1-203ENST00000517625 ADRB2P07550 413 aa2.92□□□□□ -1.94
SKP1-203ENST00000517625 HOXB6P17509 224 aaKnown RBP2.92□□□□□ -1.94
SKP1-203ENST00000517625 ITGB6P18564 788 aa2.92□□□□□ -1.94
SKP1-203ENST00000517625 NMBRP28336 390 aa2.92□□□□□ -1.94
SKP1-203ENST00000517625 MATR3P43243 847 aaKnown RBP eCLIP2.92□□□□□ -1.946e-8■■■■□ 26.1
SKP1-203ENST00000517625 NR2C2P49116 596 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms