RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 PPP1R9BQ96SB3 815 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 CDRT15Q96T59 188 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 FAM110AQ9BQ89 295 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 KXD1Q9BQD3 176 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 NRIP2Q9BQI9 281 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 STRA6Q9BX79 667 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 TKTL2Q9H0I9 626 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 NXF3Q9H4D5 531 aaKnown RBP-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 FAM83DQ9H4H8 585 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 APOBEC3GQ9HC16 384 aaKnown RBP-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 CUTCQ9NTM9 273 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 MARCH4Q9P2E8 410 aaPredicted RBP-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 KLHL9Q9P2J3 617 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 DHCR7Q9UBM7 475 aaKnown RBP-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 SLC39A10Q9ULF5 831 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 TTC7AQ9ULT0 858 aaPredicted RBP-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 MAPRE3Q9UPY8 281 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 OSGIN2Q9Y236 505 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 WIPI2Q9Y4P8 454 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 CSNK1G3Q9Y6M4 447 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 KIAA1109Q2LD37 5005 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 TNRQ92752 1358 aa-0.85□□□□□ -2.55
RNU6-1238P-201ENST00000517215 TAF1P21675 1872 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 IGLV2-33A0A075B6J2 118 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 A0A0A0MQY5 61 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 A0A0A6YYC8 382 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 A0A1B0GUA9 196 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 LOC102723971A0A1B0GUV8 181 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 TCRBV7S3A2A0A539 114 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 CCDC189A1A4V9 331 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 TMEM247A6NEH6 219 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 CAPN8A6NHC0 703 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 LRRC14BA6NHZ5 514 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 RRN3P2A6NIE6 340 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 AQP7P3A6NL99 342 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 I3L1I5 382 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 NCAM2O15394 837 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 MAGEB2O15479 319 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 HTRA2O43464 458 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 SCO2O43819 266 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 RECQL5O94762 991 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 RCBTB2O95199 551 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 LETM1O95202 739 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 VENTXO95231 258 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 FKBP9O95302 570 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 DDAH2O95865 285 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 HLA-DQA2P01906 255 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 SSBP05455 408 aaKnown RBP eCLIP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 GPIP06744 558 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 MRPL3P09001 348 aaKnown RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 ZNF806P0C7X5 589 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 SP9P0CG40 484 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 ALADP13716 330 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 ATF4P18848 351 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 VCAM1P19320 739 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 NCLP19338 710 aaKnown RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 UGT1A1P22309 533 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 RRM1P23921 792 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 EDNRBP24530 442 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 HSD3B2P26439 372 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 PDHA2P29803 388 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 MDH2P40926 338 aaKnown RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 ADCYAP1R1P41586 468 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 TSFMP43897 325 aaKnown RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 PTDSS1P48651 473 aaKnown RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 AMPHP49418 695 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 SLC16A1P53985 500 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 CDH15P55291 814 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 RIPPLY3P57055 190 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 SESN3P58005 492 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 IL2P60568 153 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 PLIN5Q00G26 463 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 TAGLNQ01995 201 aaKnown RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 NAAAQ02083 359 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 GUCY2DQ02846 1103 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 ACVR1Q04771 509 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 STK3Q13188 491 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 SLAQ13239 276 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 NOGQ13253 232 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 SART3Q15020 963 aaKnown RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 GSG1Q2KHT4 349 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 KRT24Q2M2I5 525 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 KRTAP19-8Q3LI54 63 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 ZSCAN23Q3MJ62 389 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 C3orf36Q3SXR2 165 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 CCDC14Q49A88 953 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 MTERF2Q49AM1 385 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 SPECC1Q5M775 1068 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 LMBRD2Q68DH5 695 aaPredicted RBP-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 LEMD1Q68G75 181 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 JADE1Q6IE81 842 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 TMEM88Q6PEY1 159 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 RAD9BQ6WBX8 426 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 FKBP9P1Q75LS8 142 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 HEATR3Q7Z4Q2 680 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 ANKS1BQ7Z6G8 1248 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 LONP2Q86WA8 852 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 CARM1Q86X55 608 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 CATSPER3Q86XQ3 398 aa-0.86□□□□□ -2.55
RNU6-1238P-201ENST00000517215 FOXRED2Q8IWF2 684 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms