RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 KDF1Q8NAX2 398 aaPredicted RBP10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 AVL9Q8NBF6 648 aa10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 NAT14Q8WUY8 206 aa10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 MFSD3Q96ES6 412 aa10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 CCDC97Q96F63 343 aaPredicted RBP10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 TTC1Q99614 292 aa10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 CCM2Q9BSQ5 444 aa10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 MRM3Q9HC36 420 aaKnown RBP10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 XAB2Q9HCS7 855 aaKnown RBP10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 SLC40A1Q9NP59 571 aa10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 CPNE7Q9UBL6 633 aa10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 ACSL5Q9ULC5 683 aa10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 SOX13Q9UN79 622 aa10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 WDR37Q9Y2I8 494 aa10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 ENTPD2Q9Y5L3 495 aa10.95□□□□□ -0.66
SCARNA20-201ENST00000516768 IGHV1OR21-1A0A087WYE8 117 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 TMX2-CTNND1H3BSU7 103 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 TMEM63AO94886 807 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 AP2A2O94973 939 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 PPARGP37231 505 aaPredicted RBP10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 NSG1P42857 185 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 MAGEA3P43357 314 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 UBE2IP63279 158 aaKnown RBP10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 GPLD1P80108 840 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 DR1Q01658 176 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 CYP4F3Q08477 520 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 NFE2L1Q14494 772 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 ZNF658BQ4V348 819 aaPredicted RBP10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 FASTKD1Q53R41 847 aaKnown RBP10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 RNASEH2BQ5TBB1 312 aaKnown RBP10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 AFTPHQ6ULP2 937 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 XKR5Q6UX68 686 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 PACS1Q6VY07 963 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 ZNF574Q6ZN55 896 aaPredicted RBP10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 FAM83HQ6ZRV2 1179 aaPredicted RBP10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 TMPRSS9Q7Z410 1059 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 CFAP206Q8IYR0 622 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 SIGLEC10Q96LC7 697 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 SERPINB12Q96P63 405 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 SLC38A3Q99624 504 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 UCK1Q9HA47 277 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 SYBUQ9NX95 663 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 KCNK4Q9NYG8 393 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 DKK4Q9UBT3 224 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 ANAPC5Q9UJX4 755 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 ATXN7L1Q9ULK2 861 aaPredicted RBP10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 PCDHB1Q9Y5F3 818 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 BPTFQ12830 3046 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 ACACBO00763 2458 aa10.94□□□□□ -0.66
SCARNA20-201ENST00000516768 CEP295Q9C0D2 2601 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 FAM237BA0A1B0GVD1 139 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 TMEM8BA6NDV4 472 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 OR52A4PA6NMU1 304 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 PDZK1P1A8MUH7 402 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 D6RAR5 112 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 GOLGA8MH3BSY2 632 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 QSOX1O00391 747 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 DNALI1O14645 258 aaPredicted RBP10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 CD3EAPO15446 510 aaKnown RBP10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 OR1I1O60431 355 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 VAPBO95292 243 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 CPNE6O95741 557 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 VIPP01282 170 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 GSTM1P09488 218 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 ARNTP27540 789 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 CCKBRP32239 447 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 HALP42357 657 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 ARCN1P48444 511 aaKnown RBP10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 LSSP48449 732 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 PDX1P52945 283 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 GSTM4Q03013 218 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 CFHR1Q03591 330 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 SEPT7Q16181 437 aaKnown RBP10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 RPE65Q16518 533 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 AMZ1Q400G9 498 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 CAPRIN2Q6IMN6 1127 aaKnown RBP10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 CES3Q6UWW8 571 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 TMEM26Q6ZUK4 368 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 TMEM135Q86UB9 458 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 HOOK3Q86VS8 718 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 RBM12BQ8IXT5 1001 aaKnown RBP10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 MPP5Q8N3R9 675 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 SPATA4Q8NEY3 305 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 ZFPM2Q8WW38 1151 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 ATXN7L3BQ96GX2 97 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 TMEM74Q96NL1 305 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 DPYSL5Q9BPU6 564 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 STN1Q9H668 368 aaKnown RBP10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 CCDC86Q9H6F5 360 aaKnown RBP10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 RDH14Q9HBH5 336 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 POT1Q9NUX5 634 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 PDP2Q9P2J9 529 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 ASIC3Q9UHC3 531 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 PSMD13Q9UNM6 376 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 PRSS21Q9Y6M0 314 aa10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 ZFC3H1O60293 1989 aaKnown RBP10.93□□□□□ -0.66
SCARNA20-201ENST00000516768 CHD8Q9HCK8 2581 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms