RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 ICAM1P05362 532 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 PRSS56P0CW18 603 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 HSPA1LP34931 641 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 RPS3AP61247 264 aaKnown RBP3.6□□□□□ -1.83
LINC01088-211ENST00000515597 CEBPZQ03701 1054 aaKnown RBP3.6□□□□□ -1.83
LINC01088-211ENST00000515597 CDC16Q13042 620 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 ZC2HC1CQ53FD0 456 aaPredicted RBP3.6□□□□□ -1.83
LINC01088-211ENST00000515597 TMTC3Q6ZXV5 915 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 ANO5Q75V66 913 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 MAATS1Q7Z4T9 603 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 SDCCAG8Q86SQ7 713 aaPredicted RBP3.6□□□□□ -1.83
LINC01088-211ENST00000515597 FRMD1Q8N878 549 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 RDM1Q8NG50 284 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 PERPQ96FX8 193 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 EGLN2Q96KS0 407 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 ASCL2Q99929 193 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 TMEM39BQ9GZU3 492 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 PIGMQ9H3S5 423 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 ZBTB20Q9HC78 741 aaPredicted RBP3.6□□□□□ -1.83
LINC01088-211ENST00000515597 SMC4Q9NTJ3 1288 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 ORC3Q9UBD5 711 aaPredicted RBP3.6□□□□□ -1.83
LINC01088-211ENST00000515597 AASSQ9UDR5 926 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 PRDM2Q13029 1718 aa3.6□□□□□ -1.83
LINC01088-211ENST00000515597 ABCC8Q09428 1581 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 OBSCNQ5VST9 7968 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 MAP2K7O14733 419 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 HCRTR2O43614 444 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 DDX58O95786 925 aaKnown RBP3.59□□□□□ -1.83
LINC01088-211ENST00000515597 TSHBP01222 138 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 CD4P01730 458 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 NR2F2P24468 414 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 NFKBIAP25963 317 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 CHRNB4P30926 498 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 PBX3P40426 434 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 RGS2P41220 211 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 CTSCP53634 463 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 TAS2R40P59535 323 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 FAM53AQ6NSI3 398 aaPredicted RBP3.59□□□□□ -1.83
LINC01088-211ENST00000515597 RBMS3Q6XE24 437 aaKnown RBP3.59□□□□□ -1.83
LINC01088-211ENST00000515597 TSPAN33Q86UF1 283 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 LONP2Q86WA8 852 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 GCSAMQ8N6F7 178 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 EMC1Q8N766 993 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 KCNG4Q8TDN1 519 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 LRR1Q96L50 414 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 TRPC7Q9HCX4 862 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 SLC52A3Q9NQ40 469 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 C2orf42Q9NWW7 574 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 ADPRHL2Q9NX46 363 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 MTMR10Q9NXD2 777 aa3.59□□□□□ -1.83
LINC01088-211ENST00000515597 ARHGEF40Q8TER5 1519 aa3.59□□□□□ -1.84
LINC01088-211ENST00000515597 WDR97A6NE52 1622 aa3.59□□□□□ -1.84
LINC01088-211ENST00000515597 MADDQ8WXG6 1647 aa3.59□□□□□ -1.84
LINC01088-211ENST00000515597 MAP3K4Q9Y6R4 1608 aa3.59□□□□□ -1.84
LINC01088-211ENST00000515597 A0A087X0M5 115 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 A0A1B0GX30 115 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 F5H0A9 414 aaPredicted RBP3.58□□□□□ -1.84
LINC01088-211ENST00000515597 H0YIN7 160 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 NDUFS3O75489 264 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 KCNK5O95279 499 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 TFAP2AP05549 437 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 GNB3P16520 340 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 CDH2P19022 906 aaPredicted RBP3.58□□□□□ -1.84
LINC01088-211ENST00000515597 ZNF10P21506 573 aaPredicted RBP3.58□□□□□ -1.84
LINC01088-211ENST00000515597 ARL3P36405 182 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 NOVP48745 357 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 TFAP4Q01664 338 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 MBTD1Q05BQ5 628 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 LRMPQ12912 555 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 LRIF1Q5T3J3 769 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 NCEH1Q6PIU2 408 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 CYP20A1Q6UW02 462 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 PACS1Q6VY07 963 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 C15orf39Q6ZRI6 1047 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 ARHGAP12Q8IWW6 846 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 HACE1Q8IYU2 909 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 RASGEF1CQ8N431 466 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 PDILTQ8N807 584 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 POMGNT1Q8WZA1 660 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 ARHGEF2Q92974 986 aaKnown RBP3.58□□□□□ -1.84
LINC01088-211ENST00000515597 SMC6Q96SB8 1091 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 SEMA3CQ99985 751 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 DCTN5Q9BTE1 182 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 POLR1BQ9H9Y6 1135 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 EPB41L5Q9HCM4 733 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 RRP7BPQ9NSQ0 103 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 C2CD2Q9Y426 696 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 JRKLQ9Y4A0 524 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 PBRM1Q86U86 1689 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 SIGLEC1Q9BZZ2 1709 aa3.58□□□□□ -1.84
LINC01088-211ENST00000515597 A0A0G2JLW4 131 aa3.57□□□□□ -1.84
LINC01088-211ENST00000515597 FAM237BA0A1B0GVD1 139 aa3.57□□□□□ -1.84
LINC01088-211ENST00000515597 HHLA1C9JL84 531 aa3.57□□□□□ -1.84
LINC01088-211ENST00000515597 RNASEH2AO75792 299 aaKnown RBP3.57□□□□□ -1.84
LINC01088-211ENST00000515597 CAVIN2O95810 425 aa3.57□□□□□ -1.84
LINC01088-211ENST00000515597 SCGB1D1O95968 90 aa3.57□□□□□ -1.84
LINC01088-211ENST00000515597 EIF2S1P05198 315 aaKnown RBP3.57□□□□□ -1.84
LINC01088-211ENST00000515597 EPRSP07814 1512 aaKnown RBP3.57□□□□□ -1.84
LINC01088-211ENST00000515597 CUX1P39880 1505 aa3.57□□□□□ -1.84
LINC01088-211ENST00000515597 PIK3CAP42336 1068 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms