RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 MAP4P27816 1152 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 OXTRP30559 389 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARL4AP40617 200 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MTHFRP42898 656 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SCNN1BP51168 640 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 HNRNPFP52597 415 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARFIP2P53365 341 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 NAPAP54920 295 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CSE1LP55060 971 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SESN3P58005 492 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 BFSP2Q13515 415 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 RUNX2Q13950 521 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SMUG1Q53HV7 270 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ALG10Q5BKT4 473 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SAMD4BQ5PRF9 694 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 IQSEC1Q6DN90 963 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ITPRIPL1Q6GPH6 555 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP43Q70EL4 1123 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 FRMD5Q7Z6J6 570 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CDR2LQ86X02 465 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM131BQ86XD5 332 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PTOV1Q86YD1 416 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPATA2LQ8IUW3 424 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CLYBLQ8N0X4 340 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TTC39CQ8N584 583 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 POGLUT1Q8NBL1 392 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 LEMD2Q8NC56 503 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CHST13Q8NET6 341 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 RNF138Q8WVD3 245 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MARVELD3Q96A59 401 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMA16Q96EY4 203 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 VMP1Q96GC9 406 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM176AQ96HP8 235 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MAGED4Q96JG8 741 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 B3GALT6Q96L58 329 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLITRK1Q96PX8 696 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 NPAS2Q99743 824 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 USB1Q9BQ65 265 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPR62Q9BZJ7 368 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 HOXD1Q9GZZ0 328 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SNX25Q9H3E2 840 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PRDM5Q9NQX1 630 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TOPORSQ9NS56 1045 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 RAD18Q9NS91 495 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ASNSD1Q9NWL6 643 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TAB2Q9NYJ8 693 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPATA7Q9P0W8 599 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TBC1D14Q9P2M4 693 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 WNT16Q9UBV4 365 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 NAALADL1Q9UQQ1 740 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 NCKAP1Q9Y2A7 1128 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MRPL11Q9Y3B7 192 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 C1orf226A1L170 272 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PDXKO00764 312 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 COPEO14579 308 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 AP3D1O14617 1153 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPEF2O14830 753 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 MCF2LO15068 1137 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMCC2O75069 709 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 F9P00740 461 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 IGHG1P01857 330 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 F7P08709 466 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 BMP4P12644 408 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPNP16150 400 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 VCLP18206 1134 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 NCF2P19878 526 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CHRM3P20309 590 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SERPINB3P29508 390 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 S100A7P31151 101 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 EIF2S3P41091 472 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ELK3P41970 407 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 HUNKP57058 714 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF200P98182 395 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 GALK2Q01415 458 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 GCNT1Q02742 428 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SOX4Q06945 474 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PDE4DQ08499 809 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 IL15RAQ13261 267 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 GNA13Q14344 377 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 RTP5Q14D33 572 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SEPT2Q15019 361 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 CCDC85BQ15834 202 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 GSTA3Q16772 222 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TIGD6Q17RP2 521 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ALG11Q2TAA5 492 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PROX2Q3B8N5 592 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 KLHL12Q53G59 568 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 FASTKD1Q53R41 847 aaKnown RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPANXN2Q5MJ10 180 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 C10orf91Q5T1B1 145 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF684Q5T5D7 378 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM164Q5U3C3 297 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 USP17L2Q6R6M4 530 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 C5orf24Q7Z6I8 188 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 SETD3Q86TU7 594 aaPredicted RBP1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 LRRC49Q8IUZ0 686 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 GPIHBP1Q8IV16 184 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 TEX26Q8N6G2 289 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 XXYLT1Q8NBI6 393 aa1.63□□□□□ -2.15
TRAPPC13-211ENST00000512009 PPHLN1Q8NEY8 458 aaKnown RBP1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms