RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CCNB2O95067 398 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 KCNK5O95279 499 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 MATN4O95460 622 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 C22orf31O95567 290 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 IGHEP01854 428 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 ITGAVP06756 1048 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 CNPP09543 421 aaKnown RBP4.49□□□□□ -1.69
NIPBL-206ENST00000509429 FAM86B2P0C5J1 330 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 IL1R1P14778 569 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 RAB4AP20338 218 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 PTAFRP25105 342 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 PTX3P26022 381 aaPredicted RBP4.49□□□□□ -1.69
NIPBL-206ENST00000509429 HOXC8P31273 242 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 MCAMP43121 646 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 PTPN9P43378 593 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 CASP4P49662 377 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 CLCNKBP51801 687 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 RAP1GDS1P52306 607 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 AGFG1P52594 562 aaKnown RBP4.49□□□□□ -1.69
NIPBL-206ENST00000509429 PRMT2P55345 433 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 RAB4BP61018 213 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 HNRNPKP61978 463 aaKnown RBP eCLIP4.49□□□□□ -1.69
NIPBL-206ENST00000509429 TNFRSF17Q02223 184 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 DSG1Q02413 1049 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 CHRNDQ07001 517 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 SRSF4Q08170 494 aaKnown RBP4.49□□□□□ -1.69
NIPBL-206ENST00000509429 PTK6Q13882 451 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 FASTKD3Q14CZ7 662 aaKnown RBP4.49□□□□□ -1.69
NIPBL-206ENST00000509429 PTPRRQ15256 657 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 KRT24Q2M2I5 525 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 PCGF3Q3KNV8 242 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 GTDC1Q4AE62 458 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 CCDC58Q4VC31 144 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 ZCWPW2Q504Y3 356 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 PLA1AQ53H76 456 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 MANEAQ5SRI9 462 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 PRAMEF14Q5SWL7 426 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 CCNJQ5T5M9 372 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 GARNL3Q5VVW2 1013 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 BTBD8Q5XKL5 378 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 PRMT9Q6P2P2 845 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 LINC00696Q6ZRV3 163 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 BZW1Q7L1Q6 419 aaKnown RBP4.49□□□□□ -1.69
NIPBL-206ENST00000509429 ADGRA1Q86SQ6 560 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 COL23A1Q86Y22 540 aaPredicted RBP4.49□□□□□ -1.69
NIPBL-206ENST00000509429 ARMC8Q8IUR7 673 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 IQCKQ8N0W5 287 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 LCORLQ8N3X6 602 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 PPFIBP2Q8ND30 876 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 OR8J2Q8NGG1 315 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 OR14C36Q8NHC7 312 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 LKAAEAR1Q8TD35 194 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 KCNG4Q8TDN1 519 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 SLC20A1Q8WUM9 679 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 CAPSLQ8WWF8 208 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 CPT1BQ92523 772 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 JADE3Q92613 823 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 FBXO32Q969P5 355 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 MVB12AQ96EY5 273 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 ZDHHC12Q96GR4 267 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 COQ10AQ96MF6 247 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 ANKRD27Q96NW4 1050 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 OLFM3Q96PB7 478 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 ZSCAN5AQ9BUG6 496 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 HEMGNQ9BXL5 484 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 SLC5A7Q9GZV3 580 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 RAB33BQ9H082 229 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 BLZF1Q9H2G9 400 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 NKX2-4Q9H2Z4 354 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 ST6GALNAC4Q9H4F1 302 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 C14orf93Q9H972 538 aaKnown RBP4.49□□□□□ -1.69
NIPBL-206ENST00000509429 CYP3A43Q9HB55 503 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 MRPL47Q9HD33 250 aaKnown RBP4.49□□□□□ -1.69
NIPBL-206ENST00000509429 NT5MQ9NPB1 228 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 CCM2LQ9NUG4 571 aaPredicted RBP4.49□□□□□ -1.69
NIPBL-206ENST00000509429 ABCB8Q9NUT2 735 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 TMEM140Q9NV12 185 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 INTS9Q9NV88 658 aaKnown RBP4.49□□□□□ -1.69
NIPBL-206ENST00000509429 NARFQ9UHQ1 456 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 GMEB2Q9UKD1 530 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 CDC42EP3Q9UKI2 254 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 TBX20Q9UMR3 447 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 USP18Q9UMW8 372 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 GINS2Q9Y248 185 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 CLTCL1P53675 1640 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 ABCA6Q8N139 1617 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 CHD1O14646 1710 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 ADGRL1O94910 1474 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 KIF1BO60333 1816 aa4.49□□□□□ -1.69
NIPBL-206ENST00000509429 VWDEQ8N2E2 1590 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CFAP74Q9C0B2 1584 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 ATXN2Q99700 1313 aaKnown RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 NPATQ14207 1427 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 ZCCHC11Q5TAX3 1644 aaKnown RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.48□□□□□ -1.69
NIPBL-206ENST00000509429 GSTTP1A0A1W2PQM5 241 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 A0A1W2PQU0 124 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 MTMR11A4FU01 709 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 CGB1A6NKQ9 187 aa4.48□□□□□ -1.69
NIPBL-206ENST00000509429 A8MX80 341 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms