RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 CCDC153Q494R4 210 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 KHDC1Q4VXA5 237 aaKnown RBP10.23□□□□□ -0.77
RFC1-211ENST00000509084 WDR45BQ5MNZ6 344 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 PLEKHS1Q5SXH7 462 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 AGAP9Q5VTM2 703 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 GCNT7Q6ZNI0 430 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 SH2D5Q6ZV89 423 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 LPCAT2Q7L5N7 544 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 TRIM74Q86UV6 250 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 LRRTM4Q86VH4 590 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 DCP2Q8IU60 420 aaKnown RBP10.23□□□□□ -0.77
RFC1-211ENST00000509084 CEP97Q8IW35 865 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 FAM160A2Q8N612 972 aaPredicted RBP10.23□□□□□ -0.77
RFC1-211ENST00000509084 ZBTB2Q8N680 514 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 CLDN19Q8N6F1 224 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 PNPLA1Q8N8W4 532 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 RASGEF1AQ8N9B8 481 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 ACVR1CQ8NER5 493 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 CD200R1Q8TD46 325 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 GAB3Q8WWW8 586 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 ZBTB9Q96C00 473 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 HSPA12BQ96MM6 686 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 WDR92Q96MX6 357 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 MYOCQ99972 504 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 CCM2Q9BSQ5 444 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 DUSP15Q9H1R2 295 aaPredicted RBP10.23□□□□□ -0.77
RFC1-211ENST00000509084 OR2AG1Q9H205 316 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 SARS2Q9NP81 518 aaKnown RBP10.23□□□□□ -0.77
RFC1-211ENST00000509084 KCNK9Q9NPC2 374 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 ATXN10Q9UBB4 475 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 MBD1Q9UIS9 605 aaPredicted RBP10.23□□□□□ -0.77
RFC1-211ENST00000509084 MED16Q9Y2X0 877 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 PRSS21Q9Y6M0 314 aa10.23□□□□□ -0.77
RFC1-211ENST00000509084 TECTAO75443 2155 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 C17orf113A0A1B0GUU1 675 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 TMEM120BA0PK00 339 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 OR2AG2A6NM03 316 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 TK2O00142 265 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 TNFRSF10CO14798 259 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 LIN7AO14910 233 aaPredicted RBP10.22□□□□□ -0.77
RFC1-211ENST00000509084 CHUKO15111 745 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 KMOO15229 486 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 SGTAO43765 313 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 TYROBPO43914 113 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 KLHL2O95198 593 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 WISP3O95389 354 aaPredicted RBP10.22□□□□□ -0.77
RFC1-211ENST00000509084 VCLP18206 1134 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 AOAHP28039 575 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 FNTBP49356 437 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 CLCN7P51798 805 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 IL2P60568 153 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 RACK1P63244 317 aaKnown RBP10.22□□□□□ -0.77
RFC1-211ENST00000509084 CSTF1Q05048 431 aaKnown RBP10.22□□□□□ -0.77
RFC1-211ENST00000509084 SYTL3Q4VX76 610 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 DOK6Q6PKX4 331 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 TMEM220Q6QAJ8 160 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 KDM7AQ6ZMT4 941 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 DET1Q7L5Y6 550 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 CLEC14AQ86T13 490 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 PIM3Q86V86 326 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 IQCHQ86VS3 1027 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 MYO1HQ8N1T3 1032 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 HM13Q8TCT9 377 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 ASZ1Q8WWH4 475 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 ELMO1Q92556 727 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 GLMNQ92990 594 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 RNF166Q96A37 237 aaPredicted RBP10.22□□□□□ -0.77
RFC1-211ENST00000509084 SKA1Q96BD8 255 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 SGF29Q96ES7 293 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 CCDC97Q96F63 343 aaPredicted RBP10.22□□□□□ -0.77
RFC1-211ENST00000509084 PDLIM5Q96HC4 596 aaKnown RBP10.22□□□□□ -0.77
RFC1-211ENST00000509084 BMFQ96LC9 184 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 UBXN10Q96LJ8 280 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 SLC13A1Q9BZW2 595 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 DERL2Q9GZP9 239 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 NMRAL1Q9HBL8 299 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 OGFRQ9NZT2 677 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 SLC17A4Q9Y2C5 497 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 OR1A2Q9Y585 309 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 BPTFQ12830 3046 aa10.22□□□□□ -0.77
RFC1-211ENST00000509084 POM121BA6NF01 834 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 MGAT4DA6NG13 374 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 IQCF5A8MTL0 148 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 TNFRSF10AO00220 468 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 GRID2O43424 1007 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 LILRB5O75023 590 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 SPAG7O75391 227 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 RBP1P09455 135 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 CCDC166P0CW27 439 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 MPC1LP0DKB6 136 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 CREB1P16220 341 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 ZNF8P17098 575 aaPredicted RBP10.21□□□□□ -0.77
RFC1-211ENST00000509084 ITGB6P18564 788 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 BCKDHBP21953 392 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 AVPR2P30518 371 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 DPP6P42658 865 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 CTSCP53634 463 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 CLDN2P57739 230 aa10.21□□□□□ -0.77
RFC1-211ENST00000509084 TIAL1Q01085 375 aaKnown RBP eCLIP10.21□□□□□ -0.77
RFC1-211ENST00000509084 DMWDQ09019 674 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms