RNA–Protein interactions for RNA: ENST00000508735.5

SNHG4-206, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 310 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-206ENST00000508735 APOBEC4Q8WW27 367 aaKnown RBP11.97□□□□□ -0.49
SNHG4-206ENST00000508735 P3H4Q92791 437 aa11.97□□□□□ -0.49
SNHG4-206ENST00000508735 STAMBPL1Q96FJ0 436 aa11.97□□□□□ -0.49
SNHG4-206ENST00000508735 ZDHHC12Q96GR4 267 aa11.97□□□□□ -0.49
SNHG4-206ENST00000508735 TTC25Q96NG3 672 aa11.97□□□□□ -0.49
SNHG4-206ENST00000508735 FCRL5Q96RD9 977 aa11.97□□□□□ -0.49
SNHG4-206ENST00000508735 KLHL8Q9P2G9 620 aaPredicted RBP11.97□□□□□ -0.49
SNHG4-206ENST00000508735 PSMD13Q9UNM6 376 aa11.97□□□□□ -0.49
SNHG4-206ENST00000508735 SPTA1P02549 2419 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 IGHV5-51A0A0C4DH38 117 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 GLYATL1P3A0A0U1RQE8 302 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 GOLGA6L3A6NEY3 463 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 OR2AG2A6NM03 316 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 KCNJ13O60928 360 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 TIAF1O95411 115 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 FGF5P12034 268 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 FECHP22830 423 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 CASRP41180 1078 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 MARCKSL1P49006 195 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 ERV3-1Q14264 604 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 NFE2L1Q14494 772 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 PTPRCAPQ14761 206 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 IGFBP7Q16270 282 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 RPE65Q16518 533 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 PPP2R5EQ16537 467 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 TFDP3Q5H9I0 405 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 COLEC12Q5KU26 742 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 LDLRAP1Q5SW96 308 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 GPRC6AQ5T6X5 926 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 ZDHHC20Q5W0Z9 365 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 TMEM220Q6QAJ8 160 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 PID1Q7Z2X4 250 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 GLT6D1Q7Z4J2 308 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 BEND7Q8N7W2 519 aaPredicted RBP11.96□□□□□ -0.49
SNHG4-206ENST00000508735 DDHD1Q8NEL9 900 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 IPMKQ8NFU5 416 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 QKIQ96PU8 341 aaKnown RBP eCLIP11.96□□□□□ -0.49
SNHG4-206ENST00000508735 GORASP1Q9BQQ3 440 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 RAB33BQ9H082 229 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 C10orf88Q9H8K7 445 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 SEMA5BQ9P283 1151 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 LNPEPQ9UIQ6 1025 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 TFR2Q9UP52 801 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 ALG6Q9Y672 507 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 KCNMB2Q9Y691 235 aa11.96□□□□□ -0.49
SNHG4-206ENST00000508735 HECTD1Q9ULT8 2610 aa11.96□□□□□ -0.5
SNHG4-206ENST00000508735 AKR1B15C9JRZ8 316 aaPredicted RBP11.95□□□□□ -0.5
SNHG4-206ENST00000508735 K7EM74 188 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 MTSS1O43312 755 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 KATNA1O75449 491 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 ZRANB2O95218 330 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNHG4-206ENST00000508735 FOLR1P15328 257 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 HLA-DPA1P20036 260 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 PBLDP30039 288 aaPredicted RBP11.95□□□□□ -0.5
SNHG4-206ENST00000508735 TNNT3P45378 269 aaPredicted RBP11.95□□□□□ -0.5
SNHG4-206ENST00000508735 HADHBP55084 474 aaKnown RBP11.95□□□□□ -0.5
SNHG4-206ENST00000508735 TBX2Q13207 712 aaPredicted RBP11.95□□□□□ -0.5
SNHG4-206ENST00000508735 MPP3Q13368 585 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 KCNAB1Q14722 419 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.95□□□□□ -0.51e-53■■■■□ 19.5
SNHG4-206ENST00000508735 CERS6Q6ZMG9 384 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 TMEM135Q86UB9 458 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 PPP1R3BQ86XI6 285 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 CCDC50Q8IVM0 306 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 KATNAL2Q8IYT4 538 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 RCOR2Q8IZ40 523 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 NAT14Q8WUY8 206 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 SLC41A2Q96JW4 573 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 VAT1Q99536 393 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 ANP32EQ9BTT0 268 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 ZCCHC2Q9C0B9 1178 aaKnown RBP11.95□□□□□ -0.5
SNHG4-206ENST00000508735 SMOXQ9NWM0 555 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.95□□□□□ -0.5
SNHG4-206ENST00000508735 HACD3Q9P035 362 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 ANAPC2Q9UJX6 822 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 PKP3Q9Y446 797 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 KCTD3Q9Y597 815 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 PCDHB3Q9Y5E6 796 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 ARL5AQ9Y689 179 aa11.95□□□□□ -0.5
SNHG4-206ENST00000508735 CFAP20Q9Y6A4 193 aaKnown RBP11.95□□□□□ -0.5
SNHG4-206ENST00000508735 DNMT3AQ9Y6K1 912 aaPredicted RBP11.95□□□□□ -0.5
SNHG4-206ENST00000508735 SPENQ96T58 3664 aaKnown RBP11.95□□□□□ -0.5
SNHG4-206ENST00000508735 HACD1B0YJ81 288 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 STX7O15400 261 aaKnown RBP11.94□□□□□ -0.5
SNHG4-206ENST00000508735 AGTP01019 485 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 EBLN1P0CF75 366 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 NR1D1P20393 614 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 MSH3P20585 1137 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 MAGEA1P43355 309 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 FOXK1P85037 733 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 TUBB3Q13509 450 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 OLIG2Q13516 323 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 ITGA9Q13797 1035 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 SEPT6Q14141 434 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 PLCL1Q15111 1095 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 LACTB2Q53H82 288 aaPredicted RBP11.94□□□□□ -0.5
SNHG4-206ENST00000508735 FNBP1LQ5T0N5 605 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 PWWP2BQ6NUJ5 590 aa11.94□□□□□ -0.5
SNHG4-206ENST00000508735 DUS1LQ6P1R4 473 aaKnown RBP11.94□□□□□ -0.5
SNHG4-206ENST00000508735 DET1Q7L5Y6 550 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms