RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 AK4P27144 223 aaPredicted RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 NMBRP28336 390 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 GPR3P46089 330 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 RPL21P46778 160 aaKnown RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 FASLGP48023 281 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 ADARP55265 1226 aaKnown RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 TUBB4BP68371 445 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 DHX9Q08211 1270 aaKnown RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 RPA4Q13156 261 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 TMED2Q15363 201 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 TCEA2Q15560 299 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 DBN1Q16643 649 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 CLPPQ16740 277 aaPredicted RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 PLA2G4EQ3MJ16 856 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 KHDC1Q4VXA5 237 aaKnown RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 ZNF648Q5T619 568 aaPredicted RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 AGAP9Q5VTM2 703 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 KCTD16Q68DU8 428 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 NEPROQ6NW34 567 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 DET1Q7L5Y6 550 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 EFL1Q7Z2Z2 1120 aaKnown RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 NRROSQ86YC3 692 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 ZNF547Q8IVP9 402 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 TRIM48Q8IWZ4 208 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 SLC35F3Q8IY50 421 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 GPR150Q8NGU9 434 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 OR2L2Q8NH16 312 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 CCL4L1Q8NHW4 92 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 GSDMBQ8TAX9 411 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 IFI44Q8TCB0 444 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 ADAMTS14Q8WXS8 1223 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 GRAMD1AQ96CP6 724 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 SGF29Q96ES7 293 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 SIGLEC10Q96LC7 697 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 ZNF778Q96MU6 729 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 CCDC68Q9H2F9 335 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 DPH5Q9H2P9 285 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 FAM96AQ9H5X1 160 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 FAM114A2Q9NRY5 505 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 C20orf96Q9NUD7 363 aaPredicted RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 MTRF1LQ9UGC7 380 aaKnown RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 ZC3H7BQ9UGR2 993 aaKnown RBP8.99□□□□□ -0.97
NUP54-207ENST00000508583 KCNK6Q9Y257 313 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 DNAJC16Q9Y2G8 782 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 SNX24Q9Y343 169 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 PRKAB1Q9Y478 270 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 PCDHB1Q9Y5F3 818 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 HEBP2Q9Y5Z4 205 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 FAM169AQ9Y6X4 670 aa8.99□□□□□ -0.97
NUP54-207ENST00000508583 CPED1A4D0V7 1026 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 OR51F1A6NGY5 319 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 IFRD1O00458 451 aaPredicted RBP8.98□□□□□ -0.97
NUP54-207ENST00000508583 GIPC1O14908 333 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 LIN7AO14910 233 aaPredicted RBP8.98□□□□□ -0.97
NUP54-207ENST00000508583 ZNF500O60304 480 aaPredicted RBP8.98□□□□□ -0.97
NUP54-207ENST00000508583 TCEA3O75764 348 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 DKK1O94907 266 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 RPS3P23396 243 aaKnown RBP eCLIP8.98□□□□□ -0.97
NUP54-207ENST00000508583 NDUFS1P28331 727 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 PBLDP30039 288 aaPredicted RBP8.98□□□□□ -0.97
NUP54-207ENST00000508583 CTSCP53634 463 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 HHEXQ03014 270 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 CBLBQ13191 982 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 DNAJC3Q13217 504 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 FRG1Q14331 258 aaKnown RBP8.98□□□□□ -0.97
NUP54-207ENST00000508583 HLTFQ14527 1009 aaKnown RBP eCLIP8.98□□□□□ -0.97
NUP54-207ENST00000508583 CRYMQ14894 314 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 KCTD19Q17RG1 926 aaPredicted RBP8.98□□□□□ -0.97
NUP54-207ENST00000508583 TYSND1Q2T9J0 566 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 SYTL3Q4VX76 610 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 CCDC157Q569K6 752 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 ZNF470Q6ECI4 717 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 PTRHD1Q6GMV3 140 aaKnown RBP8.98□□□□□ -0.97
NUP54-207ENST00000508583 GUSBP11Q6P575 273 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 IYDQ6PHW0 289 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 ABRAXAS1Q6UWZ7 409 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 KIAA0408Q6ZU52 694 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 C11orf96Q7Z7L8 435 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 KCNMB4Q86W47 210 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 TMPRSS12Q86WS5 348 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 CILP2Q8IUL8 1156 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 PIANPQ8IYJ0 282 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 SFRP1Q8N474 314 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 PYROXD1Q8WU10 500 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 SEC14L1Q92503 715 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 TMEM159Q96B96 161 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 CXorf40BQ96DE9 158 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 DPYSL5Q9BPU6 564 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 TMEM121BQ9BXQ6 578 aaPredicted RBP8.98□□□□□ -0.97
NUP54-207ENST00000508583 EPB41L1Q9H4G0 881 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 EPB41L5Q9HCM4 733 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 SARS2Q9NP81 518 aaKnown RBP8.98□□□□□ -0.97
NUP54-207ENST00000508583 PPANQ9NQ55 473 aaKnown RBP8.98□□□□□ -0.97
NUP54-207ENST00000508583 SPATS2LQ9NUQ6 558 aaKnown RBP8.98□□□□□ -0.97
NUP54-207ENST00000508583 POT1Q9NUX5 634 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 NSMCE4AQ9NXX6 385 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 LRIT1Q9P2V4 623 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 TBC1D29Q9UFV1 150 aa8.98□□□□□ -0.97
NUP54-207ENST00000508583 COMMD10Q9Y6G5 202 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms