RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 DNAJB14Q8TBM8 379 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 PTPMT1Q8WUK0 201 aaPredicted RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 PSPC1Q8WXF1 523 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 ZCCHC14Q8WYQ9 949 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 IRGQQ8WZA9 623 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 PIGKQ92643 395 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 ST6GALNAC6Q969X2 333 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 SLC41A3Q96GZ6 507 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 COQ10AQ96MF6 247 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 LRRC37BQ96QE4 947 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 PCDHB18PQ96TA0 734 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 MTIF3Q9H2K0 278 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 PCDH18Q9HCL0 1135 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 VANGL2Q9ULK5 521 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 PAIP2BQ9ULR5 123 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 MAD1L1Q9Y6D9 718 aa7.42□□□□□ -1.22
PDGFRA-206ENST00000508170 NCOA3Q9Y6Q9 1424 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 AOX1Q06278 1338 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 MADDQ8WXG6 1647 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 SLC35F4A4IF30 521 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 YDJCA8MPS7 323 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 H7C4K7 107 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 FANCGO15287 622 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 UFL1O94874 794 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 KDM4BO94953 1096 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 CER1O95813 267 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 CTRB1P17538 263 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 ITGB6P18564 788 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 BCL6P41182 706 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 RPS5P46782 204 aaKnown RBP7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 CAMPP49913 170 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 RIPK4P57078 832 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 CTRB2Q6GPI1 263 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 SLC25A25Q6KCM7 469 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 NDUFAF7Q7L592 441 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 VTCN1Q7Z7D3 282 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 NEK8Q86SG6 692 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 PHLDB2Q86SQ0 1253 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 OR56B1Q8NGI3 324 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 NUDT8Q8WV74 236 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 FOXRED1Q96CU9 486 aaPredicted RBP7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 INPP4AQ96PE3 977 aaPredicted RBP7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 INPP5KQ9BT40 448 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 KATNB1Q9BVA0 655 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 DDX47Q9H0S4 455 aaKnown RBP7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 FN3KRPQ9HA64 309 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 SMARCAL1Q9NZC9 954 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 BTBD7Q9P203 1132 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 RUVBL2Q9Y230 463 aaKnown RBP7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 ENTPD2Q9Y5L3 495 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 STON1Q9Y6Q2 735 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 MAU2Q9Y6X3 613 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 PTPRTO14522 1441 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 IQGAP1P46940 1657 aa7.41□□□□□ -1.22
PDGFRA-206ENST00000508170 LOC100509620A0A075B734 347 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 KANSL1LA0AUZ9 987 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 OR2W5A6NFC9 320 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 SPATA31C2B4DYI2 1134 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 KBTBD13C9JR72 458 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 RBAK-RBAKDNI3L0D1 243 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 HSF2BPO75031 334 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 CDH16O75309 829 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 CEP152O94986 1710 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 S1PR4O95977 384 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 KRT19P08727 400 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 CYP4B1P13584 511 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 UCP1P25874 307 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 PDHA2P29803 388 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 SDHAP31040 664 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 CTSKP43235 329 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 MVPQ14764 893 aaKnown RBP7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 NCAPD2Q15021 1401 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 SPHKAPQ2M3C7 1700 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 PARP6Q2NL67 630 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 PLEKHO1Q53GL0 409 aaPredicted RBP7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 TMEM41BQ5BJD5 291 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 BZW1Q7L1Q6 419 aaKnown RBP7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 CENPVQ7Z7K6 275 aaPredicted RBP7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 YRDCQ86U90 279 aaKnown RBP7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 WFDC3Q8IUB2 231 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 LILRA2Q8N149 483 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 ZBTB2Q8N680 514 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 UBA3Q8TBC4 463 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 CDADC1Q9BWV3 514 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 MCOLN1Q9GZU1 580 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 RGCCQ9H4X1 137 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 CNOT10Q9H9A5 744 aaKnown RBP7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 NEK6Q9HC98 313 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 SLAMF7Q9NQ25 335 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 MAN2C1Q9NTJ4 1040 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 DNAJB4Q9UDY4 337 aa7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 INO80Q9ULG1 1556 aaPredicted RBP7.4□□□□□ -1.22
PDGFRA-206ENST00000508170 SCAPERQ9BY12 1400 aa7.4□□□□□ -1.23
PDGFRA-206ENST00000508170 BECN2A8MW95 431 aa7.4□□□□□ -1.23
PDGFRA-206ENST00000508170 NR5A2O00482 541 aa7.4□□□□□ -1.23
PDGFRA-206ENST00000508170 WBP4O75554 376 aaKnown RBP7.4□□□□□ -1.23
PDGFRA-206ENST00000508170 RPS6KA4O75676 772 aa7.4□□□□□ -1.23
PDGFRA-206ENST00000508170 PRLP01236 227 aa7.4□□□□□ -1.23
PDGFRA-206ENST00000508170 ALDH3A1P30838 453 aa7.4□□□□□ -1.23
PDGFRA-206ENST00000508170 CPOXP36551 454 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms