RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 SFR1Q86XK3 245 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 TMEM219Q86XT9 240 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 C1orf52Q8N6N3 182 aaKnown RBP3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 Q8N9P0 234 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 KCNH5Q8NCM2 988 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 RBM15BQ8NDT2 890 aaKnown RBP3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 OR10S1Q8NGN2 331 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 TAS1R2Q8TE23 839 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 ERLEC1Q96DZ1 483 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 BICD1Q96G01 975 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 MED30Q96HR3 178 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 THOC3Q96J01 351 aaKnown RBP3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 MOV10L1Q9BXT6 1211 aaKnown RBP3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 SEMA6AQ9H2E6 1030 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 GOLPH3LQ9H4A5 285 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 HAO2Q9NYQ3 351 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 KLHL9Q9P2J3 617 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 GIMAP2Q9UG22 337 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 DDX25Q9UHL0 483 aaKnown RBP3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 ZHX1Q9UKY1 873 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 YIPF1Q9Y548 306 aa3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 ASTN2O75129 1339 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P28-201ENST00000507778 TRBC2A0A5B9 178 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 OR5K3A6NET4 321 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 C15orf62A8K5M9 175 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 A8MXE2 369 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 ANKRD66B4E2M5 251 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 TO15178 435 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 ZNHIT1O43257 154 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 SSX4O60224 188 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 PAPSS2O95340 614 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 BMP10O95393 424 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 GGPS1O95749 300 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 AFPP02771 609 aaKnown RBP3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 FAM106CPP0CH98 169 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 T-ENOLP0DO92 83 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 CCKBRP32239 447 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 THBS3P49746 956 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 CDH13P55290 713 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 PLIN5Q00G26 463 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 RELQ04864 619 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 KIF5AQ12840 1032 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 SNTA1Q13424 505 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 PSMD6Q15008 389 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 LETM2Q2VYF4 491 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 ZNF628Q5EBL2 1059 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 C1orf141Q5JVX7 400 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 ASB18Q6ZVZ8 466 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 PLEKHM3Q6ZWE6 761 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 CAMKMTQ7Z624 323 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 KMT5CQ86Y97 462 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 AFAP1Q8N556 730 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 TC2NQ8N9U0 490 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 OR52I2Q8NH67 350 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 CFAP61Q8NHU2 1237 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 WDR20Q8TBZ3 569 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 TMEM255BQ8WV15 326 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 NUDCD2Q8WVJ2 157 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 TEKT4Q8WW24 435 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 PHF21AQ96BD5 680 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 ZNF653Q96CK0 615 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 RMDN1Q96DB5 314 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 SPACA9Q96E40 222 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 PRMT6Q96LA8 375 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 OR6C1Q96RD1 312 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 NEURL2Q9BR09 285 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 SYT17Q9BSW7 474 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 HIPK2Q9H2X6 1198 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 WDR35Q9P2L0 1181 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 POU2F3Q9UKI9 436 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 OR2W1Q9Y3N9 320 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 CGNL1Q0VF96 1302 aa3.93□□□□□ -1.78
HMGB1P28-201ENST00000507778 ZCWPW2A0A1B0GU75 182 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 C4orf47A7E2U8 309 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 TMEM178BH3BS89 294 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 WDR1O75083 606 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 LDB3O75112 727 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 PFKFB1P16118 471 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 ITGA2P17301 1181 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 CPT2P23786 658 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 DNASE1P24855 282 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 TNFRSF8P28908 595 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 GABRA5P31644 462 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 IL15P40933 162 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 ART1P52961 327 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 CSE1LP55060 971 aaKnown RBP3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 FOXG1P55316 489 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 NANOS2P60321 138 aaKnown RBP3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 ZXDBP98169 803 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 FHL1Q13642 323 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 RAB6CQ53S08 254 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 IRAK1BP1Q5VVH5 260 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 NADSYN1Q6IA69 706 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 OR7E24Q6IFN5 339 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 TEX38Q6PEX7 206 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 FIGLAQ6QHK4 219 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 TMEM173Q86WV6 379 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 ZDHHC17Q8IUH5 632 aa3.92□□□□□ -1.78
HMGB1P28-201ENST00000507778 SAMD14Q8IZD0 417 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms