RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 GLOD4Q9HC38 313 aa20.62■□□□□ 0.89
SQSTM1-210ENST00000506042 FGF21Q9NSA1 209 aa20.62■□□□□ 0.89
SQSTM1-210ENST00000506042 SCHIP1Q9P0W5 487 aaPredicted RBP20.62■□□□□ 0.89
SQSTM1-210ENST00000506042 TRIM10Q9UDY6 481 aa20.62■□□□□ 0.89
SQSTM1-210ENST00000506042 SLC23A2Q9UGH3 650 aa20.62■□□□□ 0.89
SQSTM1-210ENST00000506042 FAM153AQ9UHL3 310 aa20.62■□□□□ 0.89
SQSTM1-210ENST00000506042 TLK1Q9UKI8 766 aa20.62■□□□□ 0.89
SQSTM1-210ENST00000506042 PLAAQ9Y263 795 aa20.62■□□□□ 0.89
SQSTM1-210ENST00000506042 PCDHGB7Q9Y5F8 929 aa20.62■□□□□ 0.89
SQSTM1-210ENST00000506042 MTX2O75431 263 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 PMPCBO75439 489 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 EPOP01588 193 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 AKT1P31749 480 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 SLC1A1P43005 524 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 SEMA5AQ13591 1074 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 IQCB1Q15051 598 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 UGT8Q16880 541 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 FHL5Q5TD97 284 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 TMEM126BQ8IUX1 230 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 RHOT1Q8IXI2 618 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 CT55Q8WUE5 264 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 TFB1MQ8WVM0 346 aaKnown RBP20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 RAPGEF5Q92565 580 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 SLC41A2Q96JW4 573 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 VAT1Q99536 393 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 SLC25A23Q9BV35 468 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 FSD1LQ9BXM9 530 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 SLC29A3Q9BZD2 475 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 HEBP2Q9Y5Z4 205 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 COLEC10Q9Y6Z7 277 aa20.61■□□□□ 0.89
SQSTM1-210ENST00000506042 MATN2O00339 956 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 AGFG2O95081 481 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 RALBP11234 206 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 MSH3P20585 1137 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 F8A1P23610 371 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 NDUFS1P28331 727 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 PTPN4P29074 926 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 TUBB4BP68371 445 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 TUBB2AQ13885 445 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 ATP13A5Q4VNC0 1218 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 ZNF449Q6P9G9 518 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 GLT6D1Q7Z4J2 308 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 GALNT11Q8NCW6 608 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 TUBB2BQ9BVA1 445 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 CEP41Q9BYV8 373 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 SYTL2Q9HCH5 934 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 SOHLH2Q9NX45 425 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 ACSL5Q9ULC5 683 aa20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 PCDHGA9Q9Y5G4 932 aaKnown RBP20.6■□□□□ 0.89
SQSTM1-210ENST00000506042 GLYATL1P3A0A0U1RQE8 302 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 SSU72P8A0A1W2PR75 194 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 CLEC18AA5D8T8 446 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 KIF1CO43896 1103 aaKnown RBP20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 KLHL41O60662 606 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 ZBTB11O95625 1053 aaPredicted RBP20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 SLC35G4P0C7Q5 338 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 BRAFP15056 766 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 HLA-DPA1P20036 260 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 PBX1P40424 430 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 CLEC18BQ6UXF7 455 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 ZNF547Q8IVP9 402 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 CLEC18CQ8NCF0 446 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 LRRN4Q8WUT4 740 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 CPT1BQ92523 772 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 EID2BQ96D98 161 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 TEKT5Q96M29 485 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 OLFM3Q96PB7 478 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 SLC7A5P2Q9GIP4 190 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 BPIFA1Q9NP55 256 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 IMP3Q9NV31 184 aaKnown RBP20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 SEMA5BQ9P283 1151 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 KLHL8Q9P2G9 620 aaPredicted RBP20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 ZNF451Q9Y4E5 1061 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 NAV2Q8IVL1 2488 aa20.59■□□□□ 0.89
SQSTM1-210ENST00000506042 CYSRT1A8MQ03 144 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 CBFA2T2O43439 604 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 SPOPO43791 374 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 SCRG1O75711 98 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 POP7O75817 140 aaKnown RBP20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 MT-CYBP00156 380 aaPredicted RBP20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 GYPCP04921 128 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 HNRNPH3P31942 346 aaKnown RBP20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 RRADP55042 308 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 DYNLT1P63172 113 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 GSE1Q14687 1217 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 CHRNA6Q15825 494 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 C4orf17Q53FE4 359 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 DDHD1Q8NEL9 900 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 OR8K1Q8NGG5 319 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 SLC35G2Q8TBE7 412 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 P3H4Q92791 437 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 MR1Q95460 341 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 CCDC42Q96M95 316 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 LATS2Q9NRM7 1088 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 KCND1Q9NSA2 647 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 HRASLS2Q9NWW9 162 aa20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 FARSAQ9Y285 508 aaKnown RBP20.58■□□□□ 0.89
SQSTM1-210ENST00000506042 PTPN13Q12923 2485 aa20.58■□□□□ 0.88
SQSTM1-210ENST00000506042 OR5K3A6NET4 321 aa20.57■□□□□ 0.88
SQSTM1-210ENST00000506042 STX7O15400 261 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms