RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 UGT1A8Q9HAW9 530 aa24.22■■□□□ 1.47
HERC4-212ENST00000505760 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.22■■□□□ 1.47
HERC4-212ENST00000505760 HECTD1Q9ULT8 2610 aa24.21■■□□□ 1.47
HERC4-212ENST00000505760 BUD23O43709 281 aaKnown RBP24.21■■□□□ 1.47
HERC4-212ENST00000505760 POP7O75817 140 aaKnown RBP24.21■■□□□ 1.47
HERC4-212ENST00000505760 ZNF28P17035 718 aa24.21■■□□□ 1.47
HERC4-212ENST00000505760 OAS2P29728 719 aaKnown RBP24.21■■□□□ 1.47
HERC4-212ENST00000505760 ITGA9Q13797 1035 aa24.21■■□□□ 1.47
HERC4-212ENST00000505760 DEFB109BQ30KR1 87 aa24.21■■□□□ 1.47
HERC4-212ENST00000505760 RASGEF1AQ8N9B8 481 aa24.21■■□□□ 1.47
HERC4-212ENST00000505760 GALNT6Q8NCL4 622 aa24.21■■□□□ 1.47
HERC4-212ENST00000505760 APOBEC4Q8WW27 367 aaKnown RBP24.21■■□□□ 1.47
HERC4-212ENST00000505760 STAMBPL1Q96FJ0 436 aa24.21■■□□□ 1.47
HERC4-212ENST00000505760 QKIQ96PU8 341 aaKnown RBP eCLIP24.21■■□□□ 1.47
HERC4-212ENST00000505760 EPHA6Q9UF33 1036 aa24.21■■□□□ 1.47
HERC4-212ENST00000505760 RSPH14Q9UHP6 348 aa24.21■■□□□ 1.47
HERC4-212ENST00000505760 TRHDEQ9UKU6 1024 aa24.21■■□□□ 1.47
HERC4-212ENST00000505760 HACD1B0YJ81 288 aa24.2■■□□□ 1.46
HERC4-212ENST00000505760 GPR39O43194 453 aa24.2■■□□□ 1.46
HERC4-212ENST00000505760 KIAA0754O94854 1291 aa24.2■■□□□ 1.46
HERC4-212ENST00000505760 NDUFA10O95299 355 aa24.2■■□□□ 1.46
HERC4-212ENST00000505760 DLSTP36957 453 aa24.2■■□□□ 1.46
HERC4-212ENST00000505760 CTSCP53634 463 aa24.2■■□□□ 1.46
HERC4-212ENST00000505760 TLE1Q04724 770 aa24.2■■□□□ 1.46
HERC4-212ENST00000505760 TBX2Q13207 712 aaPredicted RBP24.2■■□□□ 1.46
HERC4-212ENST00000505760 TMEM220Q6QAJ8 160 aa24.2■■□□□ 1.46
HERC4-212ENST00000505760 DDHD1Q8NEL9 900 aa24.2■■□□□ 1.46
HERC4-212ENST00000505760 C9orf43Q8TAL5 461 aaPredicted RBP24.2■■□□□ 1.46
HERC4-212ENST00000505760 RBM41Q96IZ5 413 aaKnown RBP24.2■■□□□ 1.46
HERC4-212ENST00000505760 LNPEPQ9UIQ6 1025 aa24.2■■□□□ 1.46
HERC4-212ENST00000505760 PSMD13Q9UNM6 376 aa24.2■■□□□ 1.46
HERC4-212ENST00000505760 PCDHB3Q9Y5E6 796 aa24.2■■□□□ 1.46
HERC4-212ENST00000505760 MRPS18BQ9Y676 258 aaKnown RBP24.2■■□□□ 1.46
HERC4-212ENST00000505760 OR2AG2A6NM03 316 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 STX7O15400 261 aaKnown RBP24.19■■□□□ 1.46
HERC4-212ENST00000505760 FECHP22830 423 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 AKT1P31749 480 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 MARCKSL1P49006 195 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 DMPKQ09013 629 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 CRTC2Q53ET0 693 aaPredicted RBP24.19■■□□□ 1.46
HERC4-212ENST00000505760 GPRC6AQ5T6X5 926 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 ATP1A1-AS1Q5TC04 95 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 CYB5D1Q6P9G0 228 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 KLHL35Q6PF15 583 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 KLHL6Q8WZ60 621 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 HEMGNQ9BXL5 484 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 RAB33BQ9H082 229 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 CROTQ9UKG9 612 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 DNMT3AQ9Y6K1 912 aaPredicted RBP24.19■■□□□ 1.46
HERC4-212ENST00000505760 COL12A1Q99715 3063 aa24.19■■□□□ 1.46
HERC4-212ENST00000505760 CCNYL3P0C7X3 344 aa24.18■■□□□ 1.46
HERC4-212ENST00000505760 FGF5P12034 268 aa24.18■■□□□ 1.46
HERC4-212ENST00000505760 NELFEP18615 380 aaKnown RBP24.18■■□□□ 1.46
HERC4-212ENST00000505760 F8A1P23610 371 aa24.18■■□□□ 1.46
HERC4-212ENST00000505760 PBLDP30039 288 aaPredicted RBP24.18■■□□□ 1.46
HERC4-212ENST00000505760 SEPT6Q14141 434 aa24.18■■□□□ 1.46
HERC4-212ENST00000505760 NFE2L1Q14494 772 aa24.18■■□□□ 1.46
HERC4-212ENST00000505760 PLCL1Q15111 1095 aa24.18■■□□□ 1.46
HERC4-212ENST00000505760 RPE65Q16518 533 aa24.18■■□□□ 1.46
HERC4-212ENST00000505760 CCDC181Q5TID7 509 aa24.18■■□□□ 1.46
HERC4-212ENST00000505760 FAM83HQ6ZRV2 1179 aaPredicted RBP24.18■■□□□ 1.46
HERC4-212ENST00000505760 PPP1R3BQ86XI6 285 aa24.18■■□□□ 1.46
HERC4-212ENST00000505760 GPR150Q8NGU9 434 aa24.18■■□□□ 1.46
HERC4-212ENST00000505760 FERMT1Q9BQL6 677 aa24.18■■□□□ 1.46
HERC4-212ENST00000505760 ZNF71Q9NQZ8 489 aaPredicted RBP24.18■■□□□ 1.46
HERC4-212ENST00000505760 H7C0C1 242 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 ARHGAP6O43182 974 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 MSH3P20585 1137 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 ATP5OP48047 213 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 XRCC4Q13426 336 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 SPA17Q15506 151 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 LONRF2Q1L5Z9 754 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 SKIDA1Q1XH10 827 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 FNBP1LQ5T0N5 605 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 C11orf63Q6NUN7 778 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 BBS12Q6ZW61 710 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 UBXN4Q92575 508 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 ZNF514Q96K75 400 aaPredicted RBP24.17■■□□□ 1.46
HERC4-212ENST00000505760 PDE7BQ9NP56 450 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 SMOXQ9NWM0 555 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 TFR2Q9UP52 801 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 PCDHA13Q9Y5I0 950 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 FLNCQ14315 2725 aa24.17■■□□□ 1.46
HERC4-212ENST00000505760 APOC4-APOC2K7ER74 178 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 GAPDHSO14556 408 aaPredicted RBP24.16■■□□□ 1.46
HERC4-212ENST00000505760 KATNA1O75449 491 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 SPAG6O75602 509 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 ANXA9O76027 345 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 PRAMEF1O95521 474 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 AGTP01019 485 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 APOC2P02655 101 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 CA5AP35218 305 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 GEMP55040 296 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 PPP1CAP62136 330 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 PTPRCAPQ14761 206 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.16■■□□□ 1.46
HERC4-212ENST00000505760 ITPRIPL1Q6GPH6 555 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 DET1Q7L5Y6 550 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 DAAM2Q86T65 1068 aa24.16■■□□□ 1.46
HERC4-212ENST00000505760 TC2NQ8N9U0 490 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms