RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SLC16A5O15375 505 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 SPINT2O43291 252 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 SSX4O60224 188 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 SEC22BO75396 215 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 GCNT3O95395 438 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 DANCRP0C864 163 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 GAP43P17677 238 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 MAPK3P27361 379 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 FASLGP48023 281 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 NT5C2P49902 561 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 KHKP50053 298 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 ASCL1P50553 236 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 EVCP57679 992 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 ST8SIA6P61647 398 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 IL1RL1Q01638 556 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 MELKQ14680 651 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 DNAJC21Q5F1R6 531 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 ZNF789Q5FWF6 425 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 PPP6R3Q5H9R7 873 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 CCDC158Q5M9N0 1113 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 SPOUT1Q5T280 376 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 RNASEH2BQ5TBB1 312 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 FRG2Q64ET8 278 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 FCRLBQ6BAA4 426 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 MIS18BP1Q6P0N0 1132 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 DLK2Q6UY11 383 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 ZNF793Q6ZN11 406 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 IRF2BP2Q7Z5L9 587 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 HSCBQ8IWL3 235 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 LMNTD2Q8IXW0 634 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 PEX5LQ8IYB4 626 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 CLYBLQ8N0X4 340 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 EMC1Q8N766 993 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 BOLLQ8N9W6 283 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 C9orf106Q8NAJ2 232 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 ARRDC2Q8TBH0 407 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 TBC1D16Q8TBP0 767 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 SCARB1Q8WTV0 552 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 DNAAF4Q8WXU2 420 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 TAF4BQ92750 862 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 MIB2Q96AX9 1013 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 SEMA3CQ99985 751 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 MMTAG2Q9BU76 263 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 KATNB1Q9BVA0 655 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 KLK15Q9H2R5 256 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 FZD8Q9H461 694 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 PDRG1Q9NUG6 133 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 POLLQ9UGP5 575 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 HOOK1Q9UJC3 728 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 PAM16Q9Y3D7 125 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 SRPRBQ9Y5M8 271 aaKnown RBP3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 SQORQ9Y6N5 450 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 A0A1W2PPM1 405 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 PLPP2O43688 288 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 MED24O75448 989 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 KCNK5O95279 499 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 RLN1P04808 185 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 RAB40ALP0C0E4 278 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 G6PDP11413 515 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 CHRNB2P17787 502 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 GNAZP19086 355 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 IL10P22301 178 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 ITGB8P26012 769 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 NPRL3Q12980 569 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 GAGE2BQ13066 116 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 LASP1Q14847 261 aaKnown RBP3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 PPA1Q15181 289 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 TAZQ16635 292 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 DECR1Q16698 335 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 CDO1Q16878 200 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 SYT16Q17RD7 645 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 EIF2S3LQ2VIR3 472 aaKnown RBP3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 GAGE2EQ4V326 116 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 SLC39A12Q504Y0 691 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 KLHL26Q53HC5 615 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 LCN10Q6JVE6 187 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 GAGE2AQ6NT46 116 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 KCTD18Q6PI47 426 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 TMEM270Q6UE05 265 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 BTN2A1Q7KYR7 527 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 MON1BQ7L1V2 547 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 SHFQ7M4L6 423 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 TLK2Q86UE8 772 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 RASGEF1CQ8N431 466 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 ARL6IP6Q8N6S5 226 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 RTL3Q8N8U3 475 aaKnown RBP3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 OCC1Q8TAD7 63 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 TRIB2Q92519 343 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 ORAI1Q96D31 301 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 NAP1L5Q96NT1 182 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 TMEM237Q96Q45 408 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 SLX1AQ9BQ83 275 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 WDR77Q9BQA1 342 aaPredicted RBP3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 MMP25Q9NPA2 562 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 TMEM51Q9NW97 253 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 HPF1Q9NWY4 346 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 OR6C3Q9NZP0 311 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 FLRT1Q9NZU1 646 aa3.81□□□□□ -1.8
TRAPPC13-208ENST00000505553 CNIH4Q9P003 139 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms