RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 SPP2Q13103 211 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 TNK1Q13470 666 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 PDE7AQ13946 482 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 MXD4Q14582 209 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 LPIN1Q14693 890 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 KPNB1Q14974 876 aaKnown RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 PRKD1Q15139 912 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 PFKFB3Q16875 520 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 CDO1Q16878 200 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 SOWAHAQ2M3V2 549 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 XKR9Q5GH70 373 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 PRAMEF19Q5SWL8 479 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 TSTD2Q5T7W7 516 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 DCAF12L2Q5VW00 463 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 ALS2CLQ60I27 953 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 B3GNTL1Q67FW5 361 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 SP5Q6BEB4 398 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 SULT1C3Q6IMI6 304 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 SLC27A1Q6PCB7 646 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 TMEM65Q6PI78 240 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 C1orf186Q6ZWK4 172 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 TAS2R42Q7RTR8 314 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 GDF7Q7Z4P5 450 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 SYVN1Q86TM6 617 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 TAX1BP1Q86VP1 789 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 AMZ2Q86W34 360 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 NUDT13Q86X67 352 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 RFX6Q8HWS3 928 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 SLC35F3Q8IY50 421 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 PARP16Q8N5Y8 322 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 ZNF611Q8N823 705 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 MIGA1Q8NAN2 632 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 BBOF1Q8ND07 529 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 HM13Q8TCT9 377 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 AGR3Q8TD06 166 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 TAS1R2Q8TE23 839 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 TMEM170AQ8WVE7 144 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 ANKRD49Q8WVL7 239 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 FIG4Q92562 907 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 RAD54LQ92698 747 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 SPDL1Q96EA4 605 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 ALG14Q96F25 216 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 ZNF419Q96HQ0 510 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 EGLN2Q96KS0 407 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 QRFPRQ96P65 431 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 GSDMAQ96QA5 445 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 FRG2BQ96QU4 278 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 PANX3Q96QZ0 392 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 MMS19Q96T76 1030 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 ACOX2Q99424 681 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 MNTQ99583 582 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 PRRX2Q99811 253 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 CCT7Q99832 543 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 FAM213AQ9BRX8 229 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 FNDC11Q9BVV2 318 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 GCOM2Q9BZD3 368 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 CIPCQ9C0C6 399 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 CCSER1Q9C0I3 900 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 NAPBQ9H115 298 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 HIPK3Q9H422 1215 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 NSUN3Q9H649 340 aaKnown RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 WDR6Q9NNW5 1121 aaKnown RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 RAB9BQ9NP90 201 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 FAM212BQ9NTI7 297 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 TESQ9UGI8 421 aaKnown RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 UBQLN2Q9UHD9 624 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 IPO11Q9UI26 975 aaKnown RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 TSPAN16Q9UKR8 245 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 CFAP45Q9UL16 551 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 IRAK3Q9Y616 596 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 SIRT4Q9Y6E7 314 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 U3KQV3 271 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 KDRP35968 1356 aa3.59□□□□□ -1.83
HMGB1P22-201ENST00000505315 A0A1B0GTL3 188 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 MYOCOSA0A1B0GUC4 107 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 KANSL1LA0AUZ9 987 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 MROH6A6NGR9 719 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 C9orf118A6NHY6 69 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 EBAG9O00559 213 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 MAGEB2O15479 319 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 NUDT21O43809 227 aaKnown RBP3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 ERLIN1O75477 346 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 GCATO75600 419 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 CIB2O75838 187 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 GAS8O95995 478 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 LCATP04180 440 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 CBSLP0DN79 551 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 CALCBP10092 127 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 HSPA8P11142 646 aaKnown RBP3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 GZMAP12544 262 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 ZNF18P17022 549 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 ATP6V1C1P21283 382 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 MARCKSP29966 332 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 CBSP35520 551 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 SSR1P43307 286 aaKnown RBP3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 MAGEB1P43366 347 aa3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 VCPP55072 806 aaKnown RBP3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 SNRPEP62304 92 aaKnown RBP3.58□□□□□ -1.84
HMGB1P22-201ENST00000505315 CFHR3Q02985 330 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms