RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 ATP13A5Q4VNC0 1218 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 TMTC4Q5T4D3 741 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 ATP1A1-AS1Q5TC04 95 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 ARMC6Q6NXE6 501 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 ZNF547Q8IVP9 402 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 APLFQ8IW19 511 aaPredicted RBP10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 RHOT1Q8IXI2 618 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 OR8K5Q8NH50 307 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 TFB1MQ8WVM0 346 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 RSC1A1Q92681 617 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 TADA1Q96BN2 335 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 TEKT5Q96M29 485 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 CCDC42Q96M95 316 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 OLFM3Q96PB7 478 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 VAT1Q99536 393 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 CEP41Q9BYV8 373 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 LHX9Q9NQ69 397 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 IFNKQ9P0W0 207 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 SEMA5BQ9P283 1151 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 TRIM10Q9UDY6 481 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 NENFQ9UMX5 172 aa10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 G3BP2Q9UN86 482 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 MRPS18BQ9Y676 258 aaKnown RBP10.9□□□□□ -0.66
UBE2D3-219ENST00000505207 DOPEY2Q9Y3R5 2298 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 UBA6A0AVT1 1052 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 CYSRT1A8MQ03 144 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 CBFA2T2O43439 604 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 KIF1CO43896 1103 aaKnown RBP10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 VPS4BO75351 444 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 POP7O75817 140 aaKnown RBP10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 MT-CYBP00156 380 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 SPAM1P38567 509 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 HSD11B2P80365 405 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 DMPKQ09013 629 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 XRCC4Q13426 336 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 LONRF2Q1L5Z9 754 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 DNTTIP2Q5QJE6 756 aaKnown RBP10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 CPNE8Q86YQ8 564 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 CARFQ8N187 725 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 SPATA22Q8NHS9 363 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 SLC41A2Q96JW4 573 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 FERMT1Q9BQL6 677 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 LRRC4CQ9HCJ2 640 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 BPIFA1Q9NP55 256 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 IL26Q9NPH9 171 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 TLK1Q9UKI8 766 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 ACSL5Q9ULC5 683 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 VPS4AQ9UN37 437 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 FLNCQ14315 2725 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 LRRK2Q5S007 2527 aa10.89□□□□□ -0.67
UBE2D3-219ENST00000505207 GLYATL1P3A0A0U1RQE8 302 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 LOC285095A0A1B0GVY8 99 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 SYCE3A1L190 88 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 TLCD2A6NGC4 264 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 C3orf70A6NLC5 250 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 SPOPO43791 374 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 KLK3P07288 261 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 HLA-DPA1P20036 260 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 MSH3P20585 1137 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 PTPN3P26045 913 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 PTPN4P29074 926 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 CD97P48960 835 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 PGDP52209 483 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 WNT3AP56704 352 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 DYNLT1P63172 113 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 SEMA5AQ13591 1074 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 KRT33BQ14525 404 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 RPE65Q16518 533 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 TMEM220Q6QAJ8 160 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 NPNTQ6UXI9 565 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 PID1Q7Z2X4 250 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 GLT6D1Q7Z4J2 308 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 C11orf96Q7Z7L8 435 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 SYVN1Q86TM6 617 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 OOSP2Q86WS3 158 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 CT55Q8WUE5 264 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 P3H4Q92791 437 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 MIB2Q96AX9 1013 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 PACSIN1Q9BY11 444 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 ACTL8Q9H568 366 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 FANCEQ9HB96 536 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 FGF21Q9NSA1 209 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 HRASLS2Q9NWW9 162 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 UBP1Q9NZI7 540 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 KLHL8Q9P2G9 620 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 TRHDEQ9UKU6 1024 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 PLAAQ9Y263 795 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 FARSAQ9Y285 508 aaKnown RBP10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 SPO11Q9Y5K1 396 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 HEBP2Q9Y5Z4 205 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 COLEC10Q9Y6Z7 277 aa10.88□□□□□ -0.67
UBE2D3-219ENST00000505207 RP1L1Q8IWN7 2480 aaPredicted RBP10.87□□□□□ -0.67
UBE2D3-219ENST00000505207 IGHV5-51A0A0C4DH38 117 aa10.87□□□□□ -0.67
UBE2D3-219ENST00000505207 CLEC18AA5D8T8 446 aa10.87□□□□□ -0.67
UBE2D3-219ENST00000505207 TTLL8A6PVC2 850 aa10.87□□□□□ -0.67
UBE2D3-219ENST00000505207 AURKAO14965 403 aa10.87□□□□□ -0.67
UBE2D3-219ENST00000505207 STX7O15400 261 aaKnown RBP10.87□□□□□ -0.67
UBE2D3-219ENST00000505207 CPNE3O75131 537 aaKnown RBP10.87□□□□□ -0.67
UBE2D3-219ENST00000505207 ZBTB11O95625 1053 aaPredicted RBP10.87□□□□□ -0.67
UBE2D3-219ENST00000505207 RALBP11234 206 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms