RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 STC1P52823 247 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 HSD11B2P80365 405 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 OTUD4Q01804 1114 aaKnown RBP5.89□□□□□ -1.47
GYPB-204ENST00000504951 CDK18Q07002 472 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 CHAF1BQ13112 559 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 TUBB3Q13509 450 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 PTPRRQ15256 657 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 KRT31Q15323 416 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 CA9Q16790 459 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 CLEC16AQ2KHT3 1053 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 SMTNL2Q2TAL5 461 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 PLEKHS1Q5SXH7 462 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 ZFYVE27Q5T4F4 411 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 ZNF324BQ6AW86 544 aaPredicted RBP5.89□□□□□ -1.47
GYPB-204ENST00000504951 SCYL2Q6P3W7 929 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 KLHL35Q6PF15 583 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 RPTNQ6XPR3 784 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 ARHGAP36Q6ZRI8 547 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 USP45Q70EL2 814 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 MON1BQ7L1V2 547 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 CUZD1Q86UP6 607 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 ZNF354CQ86Y25 554 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 PHF13Q86YI8 300 aaPredicted RBP5.89□□□□□ -1.47
GYPB-204ENST00000504951 RAB43Q86YS6 212 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 NDUFAF2Q8N183 169 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 GALNT16Q8N428 558 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 PIH1D2Q8WWB5 315 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 AP2M1Q96CW1 435 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 ZNF501Q96CX3 271 aaPredicted RBP5.89□□□□□ -1.47
GYPB-204ENST00000504951 SGSM3Q96HU1 749 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 CELF6Q96J87 481 aaKnown RBP5.89□□□□□ -1.47
GYPB-204ENST00000504951 C17orf62Q9BQA9 187 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 TRIM56Q9BRZ2 755 aaKnown RBP5.89□□□□□ -1.47
GYPB-204ENST00000504951 XPO4Q9C0E2 1151 aaKnown RBP5.89□□□□□ -1.47
GYPB-204ENST00000504951 SLC39A8Q9C0K1 460 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 ZMYND15Q9H091 742 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 ILKAPQ9H0C8 392 aaPredicted RBP5.89□□□□□ -1.47
GYPB-204ENST00000504951 FGF21Q9NSA1 209 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 GPATCH2LQ9NWQ4 482 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 ADAM22Q9P0K1 906 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 ZNF624Q9P2J8 865 aaPredicted RBP5.89□□□□□ -1.47
GYPB-204ENST00000504951 KLHL3Q9UH77 587 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 FZD10Q9ULW2 581 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 SNX7Q9UNH6 387 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 BTRCQ9Y297 605 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 SIK3Q9Y2K2 1263 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 TMEM98Q9Y2Y6 226 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 MYO7BQ6PIF6 2116 aa5.89□□□□□ -1.47
GYPB-204ENST00000504951 CNTRLQ7Z7A1 2325 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 IGHV5-51A0A0C4DH38 117 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 NPIPB15A6NHN6 443 aaPredicted RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 SIGLEC16A6NMB1 481 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 PCDH17O14917 1159 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 GRID2O43424 1007 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 KLF7O75840 302 aaPredicted RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 RASSF9O75901 435 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 VIPP01282 170 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 PROCP04070 461 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 MX2P20592 715 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 CES1P23141 567 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 EEF1GP26641 437 aaKnown RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 HTR1EP28566 365 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 MAP2K3P46734 347 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 GLRBP48167 497 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 SEPHS1P49903 392 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 PAPOLAP51003 745 aaKnown RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 ZNF143P52747 638 aaPredicted RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 RPL26P61254 145 aaKnown RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 RPS18P62269 152 aaKnown RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 GPS2Q13227 327 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 PLCL1Q15111 1095 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 VWA2Q5GFL6 755 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 DCAF10Q5QP82 559 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 HENMT1Q5T8I9 393 aaKnown RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 CDKAL1Q5VV42 579 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 PDPK2PQ6A1A2 396 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 FAM199XQ6PEV8 388 aaPredicted RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 CHST15Q7LFX5 561 aaPredicted RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 PHYKPLQ8IUZ5 450 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 PSTKQ8IV42 348 aaKnown RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 ARHGAP12Q8IWW6 846 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 NPWQ8N729 165 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 SIDT2Q8NBJ9 832 aaKnown RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 SLC38A9Q8NBW4 561 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 C3orf20Q8ND61 904 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 CPT1BQ92523 772 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 MCEEQ96PE7 176 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 TGM7Q96PF1 710 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 PEBP4Q96S96 227 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 RUFY1Q96T51 708 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 WDR77Q9BQA1 342 aaPredicted RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 MGME1Q9BQP7 344 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 TIMM29Q9BSF4 260 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 SELENOOQ9BVL4 669 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 CINPQ9BW66 212 aaPredicted RBP5.88□□□□□ -1.47
GYPB-204ENST00000504951 TRIM7Q9C029 511 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 CHST8Q9H2A9 424 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 MCCC2Q9HCC0 563 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 LUZP4Q9P127 313 aa5.88□□□□□ -1.47
GYPB-204ENST00000504951 RPL26L1Q9UNX3 145 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms