RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 SRP54P61011 504 aaKnown RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 PRAMEP78395 509 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CTBSQ01459 385 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 MGAT5Q09328 741 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 SPEM2Q0P670 501 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 HLTFQ14527 1009 aaKnown RBP eCLIP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 SLMAPQ14BN4 828 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 ZKSCAN8Q15776 578 aaPredicted RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 ZXDCQ2QGD7 858 aaPredicted RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 TNFAIP8L3Q5GJ75 292 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 LDLRAP1Q5SW96 308 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CASC4Q6P4E1 433 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 EMBQ6PCB8 327 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 OGFOD3Q6PK18 319 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 ENPP7Q6UWV6 458 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 TRMT10CQ7L0Y3 403 aaKnown RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 SLC26A11Q86WA9 606 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 VRK3Q8IV63 474 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CEP97Q8IW35 865 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 PHACTR4Q8IZ21 702 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 NAGSQ8N159 534 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 ZNF548Q8NEK5 533 aaPredicted RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 OR6P1Q8NGX9 317 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CEP76Q8TAP6 659 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 DCAKDQ8WVC6 231 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 HNRNPLLQ8WVV9 542 aaKnown RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 SLC44A1Q8WWI5 657 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CFAP36Q96G28 342 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 COPS8Q99627 209 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 RBBP8Q99708 897 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 OLFM1Q99784 485 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 MENTQ9BUN1 341 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 TSPYL1Q9H0U9 437 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 OR52A5Q9H2C5 316 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 RMI1Q9H9A7 625 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 FBXO6Q9NRD1 293 aaPredicted RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 AASDHPPTQ9NRN7 309 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 IARS2Q9NSE4 1012 aaKnown RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 C20orf96Q9NUD7 363 aaPredicted RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 INTS10Q9NVR2 710 aaKnown RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 SCHIP1Q9P0W5 487 aaPredicted RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 SAMD15Q9P1V8 674 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 MTRF1LQ9UGC7 380 aaKnown RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 FETUBQ9UGM5 382 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 WDR37Q9Y2I8 494 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 PRKAB1Q9Y478 270 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 SLC30A1Q9Y6M5 507 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CNOT1A5YKK6 2376 aaKnown RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 C17orf113A0A1B0GUU1 675 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CACNB4O00305 520 aaPredicted RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 YY2O15391 372 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 GRID2O43424 1007 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 NOBOXO60393 691 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 NIPSNAP2O75323 286 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 TCEA3O75764 348 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 SLCO2B1O94956 709 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 AP2A2O94973 939 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 ACSL3O95573 720 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 ALDOAP04075 364 aaKnown RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 GNSP15586 552 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 FDXRP22570 491 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 AOAHP28039 575 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 ACADLP28330 430 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 GMPRP36959 345 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 LIMK2P53671 638 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CDKN2DP55273 166 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 ARHGAP8P85298 464 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 GRB7Q14451 532 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 RASA2Q15283 850 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 FASTKD1Q53R41 847 aaKnown RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 ZRANB3Q5FWF4 1079 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 METRNLQ641Q3 311 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CAPRIN2Q6IMN6 1127 aaKnown RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 ABRAXAS1Q6UWZ7 409 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CYHR1Q6ZMK1 362 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 PRR23CQ6ZRP0 262 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CAPN12Q6ZSI9 719 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 RABEPKQ7Z6M1 372 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CCDC25Q86WR0 208 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 LRRC6Q86X45 466 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 TMEM151AQ8N4L1 468 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 PAF1Q8N7H5 531 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 GPR156Q8NFN8 814 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 OR2L2Q8NH16 312 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CD200R1Q8TD46 325 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 DLG3Q92796 817 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 KCNJ9Q92806 393 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 ULK4Q96C45 1275 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 VPS39Q96JC1 886 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 UBXN10Q96LJ8 280 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 GPR22Q99680 433 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 TIMM29Q9BSF4 260 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 AARSD1Q9BTE6 412 aaKnown RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 ZDHHC5Q9C0B5 715 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 RHOJQ9H4E5 214 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CYP4F12Q9HCS2 524 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 SPATS2LQ9NUQ6 558 aaKnown RBP4.86□□□□□ -1.63
LMNB1-208ENST00000504788 TBC1D29Q9UFV1 150 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 CRLS1Q9UJA2 301 aa4.86□□□□□ -1.63
LMNB1-208ENST00000504788 IKZF3Q9UKT9 509 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms