RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 PLEKHN1Q494U1 663 aaPredicted RBP3.57□□□□□ -1.84
USP46-205ENST00000504078 PYCR3Q53H96 274 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 TDRD12Q587J7 1177 aaKnown RBP3.57□□□□□ -1.84
USP46-205ENST00000504078 HSP90AA4PQ58FG1 418 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.57□□□□□ -1.84
USP46-205ENST00000504078 ZNF658Q5TYW1 1059 aaPredicted RBP3.57□□□□□ -1.84
USP46-205ENST00000504078 CACHD1Q5VU97 1274 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 ALS2CLQ60I27 953 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 LRRC66Q68CR7 880 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 PWWP2BQ6NUJ5 590 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 TTI2Q6NXR4 508 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 SCYL2Q6P3W7 929 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 BRAT1Q6PJG6 821 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 FAM198BQ6UWH4 519 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 NCCRP1Q6ZVX7 275 aaPredicted RBP3.57□□□□□ -1.84
USP46-205ENST00000504078 SRLQ86TD4 932 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 NOP9Q86U38 636 aaKnown RBP3.57□□□□□ -1.84
USP46-205ENST00000504078 CDH24Q86UP0 819 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 CUZD1Q86UP6 607 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 TMEM126BQ8IUX1 230 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 APLFQ8IW19 511 aaPredicted RBP3.57□□□□□ -1.84
USP46-205ENST00000504078 TRIM48Q8IWZ4 208 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 SFRP1Q8N474 314 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 NPWQ8N729 165 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 ZNF397Q8NF99 534 aaPredicted RBP3.57□□□□□ -1.84
USP46-205ENST00000504078 GPR150Q8NGU9 434 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 SLC30A5Q8TAD4 765 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 UBE2Q2Q8WVN8 375 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 RXFP2Q8WXD0 754 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 SHC3Q92529 594 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 PNPLA2Q96AD5 504 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 CNDP1Q96KN2 507 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 C9orf72Q96LT7 481 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 PPM1MQ96MI6 270 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 TRAPPC9Q96Q05 1148 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 TLR10Q9BXR5 811 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 TEX101Q9BY14 249 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 MAGEH1Q9H213 219 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 CHST8Q9H2A9 424 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 TRIT1Q9H3H1 467 aaKnown RBP3.57□□□□□ -1.84
USP46-205ENST00000504078 STN1Q9H668 368 aaKnown RBP3.57□□□□□ -1.84
USP46-205ENST00000504078 ATP13A3Q9H7F0 1226 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 SIX2Q9NPC8 291 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 FBXO8Q9NRD0 319 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 LATS2Q9NRM7 1088 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 TRNAU1APQ9NX07 287 aaKnown RBP3.57□□□□□ -1.84
USP46-205ENST00000504078 GPR83Q9NYM4 423 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 COPG2Q9UBF2 871 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 PPARGC1AQ9UBK2 798 aaKnown RBP3.57□□□□□ -1.84
USP46-205ENST00000504078 CPNE7Q9UBL6 633 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 FAM8A1Q9UBU6 413 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 ZNHIT2Q9UHR6 403 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 MAN1B1Q9UKM7 699 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 SNX7Q9UNH6 387 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 CNTN6Q9UQ52 1028 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 ENTPD4Q9Y227 616 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 SLC17A4Q9Y2C5 497 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 SIK3Q9Y2K2 1263 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 TTLL3Q9Y4R7 772 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.57□□□□□ -1.84
USP46-205ENST00000504078 FHOD1Q9Y613 1164 aa3.57□□□□□ -1.84
USP46-205ENST00000504078 NUP210LQ5VU65 1888 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 IGHV5-51A0A0C4DH38 117 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 FADS2P1A8MWK0 482 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 C19orf84I3L1E1 186 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 FOXN3O00409 490 aaPredicted RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 PES1O00541 588 aaKnown RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 PSMA7O14818 248 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 GPR39O43194 453 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 ZW10O43264 779 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 PRAMEF11O60813 436 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 SCRG1O75711 98 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 PALMO75781 387 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 UBXN7O94888 489 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 MYL1P05976 194 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 CTSBP07858 339 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 COX6B1P14854 86 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 AMD1P17707 334 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 CMA1P23946 247 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 RPL10P27635 214 aaKnown RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 SDC4P31431 198 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 ADRA1BP35368 520 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 TRIM23P36406 574 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 CAPZBP47756 277 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 EIF1AXP47813 144 aaKnown RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 PAPOLAP51003 745 aaKnown RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 DRG2P55039 364 aaKnown RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 UBE2IP63279 158 aaKnown RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 NOMO3P69849 1222 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 LRRC63Q05C16 580 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 LAMB3Q13751 1172 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 ZNF235Q14590 738 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 MEA1Q16626 185 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 CLPPQ16740 277 aaPredicted RBP3.56□□□□□ -1.84
USP46-205ENST00000504078 CA9Q16790 459 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 INSCQ1MX18 579 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 DEFB110Q30KQ9 67 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 CCDC14Q49A88 953 aa3.56□□□□□ -1.84
USP46-205ENST00000504078 VWA5B1Q5TIE3 1220 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms