RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 ATAD3CQ5T2N8 411 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 PDSS1Q5T2R2 415 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC6A19Q695T7 634 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 SUSD1Q6UWL2 747 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 ABRAXAS1Q6UWZ7 409 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 PRR23BQ6ZRT6 265 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 ZNF438Q7Z4V0 828 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 ZDHHC17Q8IUH5 632 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 TMEM126BQ8IUX1 230 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 CHERPQ8IWX8 916 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 CMASQ8NFW8 434 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 GRIN3AQ8TCU5 1115 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 UTP15Q8TED0 518 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC20A1Q8WUM9 679 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 TBATAQ96M53 351 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 CNPY3Q9BT09 278 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 EFHD1Q9BUP0 239 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 C6orf62Q9GZU0 229 aaPredicted RBP9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 HMG20AQ9NP66 347 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 IARS2Q9NSE4 1012 aaKnown RBP9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 DZANK1Q9NVP4 752 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 NPAP1Q9NZP6 1156 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 INVSQ9Y283 1065 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 SNX13Q9Y5W8 968 aa9.52□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC22A2O15244 555 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 PPM1BO75688 479 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 BEST1O76090 585 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 SERPING1P05155 500 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 CFHP08603 1231 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 HNRNPA1P09651 372 aaKnown RBP eCLIP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 ZNF182P17025 639 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 TMEM11P17152 192 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 IMPDH1P20839 514 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 F8A1P23610 371 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 SOX6P35712 828 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 STARP49675 285 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 RPL10AP62906 217 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 RNF4P78317 190 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 TXNL4AP83876 142 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 CALCOCO2Q13137 446 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 NCF4Q15080 339 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 RPS6KA1Q15418 735 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 C6orf52Q5T4I8 152 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 LIN9Q5TKA1 542 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 KRT74Q7RTS7 529 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 ERMP1Q7Z2K6 904 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 LACC1Q8IV20 430 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 RASGEF1CQ8N431 466 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC7A14Q8TBB6 771 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC26A7Q8TE54 656 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC35F5Q8WV83 523 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 ASZ1Q8WWH4 475 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 TRMT2BQ96GJ1 504 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 PRR11Q96HE9 360 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 PPP1R36Q96LQ0 422 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 RBM15Q96T37 977 aaKnown RBP eCLIP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 TRIM51Q9BSJ1 452 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 MED10Q9BTT4 135 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 PPA2Q9H2U2 334 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 OSGEPL1Q9H4B0 414 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 MVB12BQ9H7P6 319 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 AKIP1Q9NQ31 210 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 ANLNQ9NQW6 1124 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 PLSCR3Q9NRY6 295 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 COA4Q9NYJ1 87 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 SLC27A5Q9Y2P5 690 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 SSU72P8A0A1W2PR75 194 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 HEATR9A2RTY3 570 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 FAM47DPA6NHR8 397 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 ARGFXA6NJG6 315 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 F8VP50 259 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 M0QYV0 167 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 KCNK3O14649 394 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 TNFRSF10BO14763 440 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 PCDH17O14917 1159 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 LINC01565O15544 149 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 BRINP1O60477 761 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 BCAS1O75363 584 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 SPAG6O75602 509 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 LSM8O95777 96 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 NDST3O95803 873 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 BCL10O95999 233 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 NTRK1P04629 796 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 UGT2B4P06133 528 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 PSKH1P11801 424 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 PSMC3P17980 439 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 DDCP20711 480 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 IGFBP4P22692 258 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 LEPRP48357 1165 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 KCNJ5P48544 419 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 CDKL1Q00532 357 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 DDR2Q16832 855 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 MGAT5BQ3V5L5 792 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 RAB41Q5JT25 222 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 LETMD1Q6P1Q0 360 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 DENND1BQ6P3S1 775 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 DCUN1D2Q6PH85 259 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 TRIM72Q6ZMU5 477 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 MACC1Q6ZN28 852 aa9.51□□□□□ -0.89
PDLIM5-207ENST00000503974 ATG14Q6ZNE5 492 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms