RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 CFAP52Q8N1V2 620 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 RAB42Q8N4Z0 105 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 OR2AP1Q8NGE2 309 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 ZFAND2BQ8WV99 257 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 UBE2E3Q969T4 207 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 PRICKLE1Q96MT3 831 aaPredicted RBP7.32□□□□□ -1.24
PDGFC-203ENST00000502773 TMEM106CQ9BVX2 250 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 MRPS26Q9BYN8 205 aaKnown RBP7.32□□□□□ -1.24
PDGFC-203ENST00000502773 NKX1-2Q9UD57 310 aaPredicted RBP7.32□□□□□ -1.24
PDGFC-203ENST00000502773 ARL5AQ9Y689 179 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 COMMD3-BMI1R4GMX3 469 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 RNF103-CHMP3A0A140T963 221 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 MEI4A8MW99 385 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 EVPLLA8MZ36 301 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 BOLA2-SMG1P6H3BVE0 249 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 I6L893 689 aaPredicted RBP7.32□□□□□ -1.24
PDGFC-203ENST00000502773 TEX28O15482 410 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 DENRO43583 198 aaKnown RBP7.32□□□□□ -1.24
PDGFC-203ENST00000502773 TSPAN3O60637 253 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 SNAP91O60641 907 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 DEAF1O75398 565 aaPredicted RBP7.32□□□□□ -1.24
PDGFC-203ENST00000502773 MMP2P08253 660 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 HSD17B1P14061 328 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 POLR2EP19388 210 aaKnown RBP7.32□□□□□ -1.24
PDGFC-203ENST00000502773 CR2P20023 1033 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 CTGFP29279 349 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 ABCG1P45844 678 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 CDKL1Q00532 357 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 TUBA3CQ13748 450 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 FAM98BQ52LJ0 330 aaKnown RBP7.32□□□□□ -1.24
PDGFC-203ENST00000502773 VWA5B1Q5TIE3 1220 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 LRRC70Q7Z2Q7 622 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 DSG4Q86SJ6 1040 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 LINC01599Q8WXQ3 324 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 ZNF778Q96MU6 729 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 GSTO2Q9H4Y5 243 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 CD320Q9NPF0 282 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 SPEF1Q9Y4P9 236 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 SNX13Q9Y5W8 968 aa7.32□□□□□ -1.24
PDGFC-203ENST00000502773 GPC6Q9Y625 555 aaPredicted RBP7.32□□□□□ -1.24
PDGFC-203ENST00000502773 C1orf232A0A0U1RR37 186 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 A0A1W2PP18 115 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 PER2O15055 1255 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 KLK8O60259 260 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ULK1O75385 1050 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 KCNH1O95259 989 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 RPS17P08708 135 aaKnown RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 EBLN1P0CF75 366 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 GABRR2P28476 465 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 RPS24P62847 133 aaKnown RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 MACC1Q6ZN28 852 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 PDSS2Q86YH6 399 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 HPS6Q86YV9 775 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 PELI3Q8N2H9 469 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 OLFM1Q99784 485 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 KCTD14Q9BQ13 255 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ASPSCR1Q9BZE9 553 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ACTR3BQ9P1U1 418 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 TRPS1Q9UHF7 1281 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 FAM50BQ9Y247 325 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 INSL6Q9Y581 213 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 CPQQ9Y646 472 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 NR5A2O00482 541 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 PRMT3O60678 531 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 CTSAP10619 480 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 RPL5P46777 297 aaKnown RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 CHRNB3Q05901 458 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 SMAD1Q15797 465 aaKnown RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 HIST2H2ACQ16777 129 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 RFX4Q33E94 735 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 CARD16Q5EG05 197 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 TCHHL1Q5QJ38 904 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 PLEKHS1Q5SXH7 462 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 OGFRL1Q5TC84 451 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 HIST2H2AA3Q6FI13 130 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 NADSYN1Q6IA69 706 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 TUBA3EQ6PEY2 450 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 PAQR3Q6TCH7 311 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ZBTB49Q6ZSB9 765 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 LARP4Q71RC2 724 aaKnown RBP eCLIP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 AHI1Q8N157 1196 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 PHTF2Q8N3S3 785 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 FNDC5Q8NAU1 212 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 OR13C4Q8NGS5 318 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 SLC45A3Q96JT2 553 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 SAMD11Q96NU1 681 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 DPY30Q9C005 99 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 C20orf27Q9GZN8 174 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 RAD21L1Q9H4I0 556 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ZNF395Q9H8N7 513 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 C12orf4Q9NQ89 552 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ATAD3AQ9NVI7 634 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 IL17CQ9P0M4 197 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 PTBP2Q9UKA9 531 aaKnown RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 OARD1Q9Y530 152 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 HNRNPCL2B2RXH8 293 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 AKAP10O43572 662 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 ECI2O75521 394 aa7.31□□□□□ -1.24
PDGFC-203ENST00000502773 RECQL5O94762 991 aaPredicted RBP7.31□□□□□ -1.24
PDGFC-203ENST00000502773 FOSL1P15407 271 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms