RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 FOXD2O60548 495 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 PLOD3O60568 738 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 MYF6P23409 242 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 ICAM3P32942 547 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 ZNF132P52740 706 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 PLD1Q13393 1074 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 TPRG1LQ5T0D9 272 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 TUBA3EQ6PEY2 450 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 TBATAQ96M53 351 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 AGO3Q9H9G7 860 aaKnown RBP17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 MRPL39Q9NYK5 338 aaKnown RBP17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 HMGXB4Q9UGU5 601 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 VPS4AQ9UN37 437 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 CEPT1Q9Y6K0 416 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 YES1P07947 543 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 ENO2P09104 434 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 TYMPP19971 482 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 ARSFP54793 590 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 ZNF404Q494X3 552 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 TMEM209Q96SK2 561 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 BCO2Q9BYV7 579 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 KLHL1Q9NR64 748 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 LAMA4Q16363 1823 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 LOC100130705A0A1B0GUX0 176 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 FAM182AQ5T1J6 154 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 ARMC12Q5T9G4 340 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 LCN1P1Q5VSP4 162 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 RETSATQ6NUM9 610 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 C11orf88Q6PI97 169 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 DET1Q7L5Y6 550 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 FCRL5Q96RD9 977 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 PDZD7Q9H5P4 517 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 TFB2MQ9H5Q4 396 aaKnown RBP17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 MKLN1Q9UL63 735 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 SDHDO14521 159 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 STAT5AP42229 794 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 TXNL4AP83876 142 aaKnown RBP17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 TIGD6Q17RP2 521 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 TMIGD2Q96BF3 282 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 MED8Q96G25 268 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 MUS81Q96NY9 551 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 NUDT4Q9NZJ9 180 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 ZIM2Q9NZV7 527 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 ZNF490Q9ULM2 529 aaPredicted RBP17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 A0A1W2PQ72 361 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 ISPDA4D126 451 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 MPZL2O60487 215 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 OR4F21O95013 312 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 TFAP2AP05549 437 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 SDC2P34741 201 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 KIR3DL1P43629 444 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 NFATC3Q12968 1075 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 GALNT3Q14435 633 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 ATP6AP1Q15904 470 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 DPP10Q8N608 796 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 SMAD5Q99717 465 aaKnown RBP17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 MARCH2Q9P0N8 246 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 RWDD3Q9Y3V2 267 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 RIPK3Q9Y572 518 aa17.03■□□□□ 0.32
HMGXB3-201ENST00000502717 IL7RP16871 459 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 AZGP1P25311 298 aaKnown RBP17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 UGT2B15P54855 530 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 BOP1Q14137 746 aaKnown RBP17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 ANXA8L1Q5VT79 327 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 COPS5Q92905 334 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 KLHL5Q96PQ7 755 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 TWNKQ96RR1 684 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 GINS4Q9BRT9 223 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 STRA6Q9BX79 667 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 SLC28A3Q9HAS3 691 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 SMOXQ9NWM0 555 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 SPEF1Q9Y4P9 236 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 NUP188Q5SRE5 1749 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 HTR3EA5X5Y0 456 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 SSNA1O43805 119 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 MFSD10Q14728 455 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 OR8H1Q8NGG4 311 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 TP53INP1Q96A56 240 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 GPR21Q99679 349 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 HNRNPABQ99729 332 aaKnown RBP17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 RNF38Q9H0F5 515 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 ASB8Q9H765 288 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 TRPV5Q9NQA5 729 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 FBXW11Q9UKB1 542 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 CYP7B1O75881 506 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 LRATO95237 230 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 BMP2P12643 396 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 NDST2P52849 883 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 OOSP2Q86WS3 158 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 TSPEARQ8WU66 669 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 TSSK3Q96PN8 268 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 PRELID1Q9Y255 219 aa17.02■□□□□ 0.32
HMGXB3-201ENST00000502717 TNFRSF11BO00300 401 aa17.02■□□□□ 0.31
HMGXB3-201ENST00000502717 GRK4P32298 578 aa17.02■□□□□ 0.31
HMGXB3-201ENST00000502717 SLC15A1P46059 708 aa17.02■□□□□ 0.31
HMGXB3-201ENST00000502717 MEP1AQ16819 746 aa17.02■□□□□ 0.31
HMGXB3-201ENST00000502717 RAP1GAP2Q684P5 730 aa17.02■□□□□ 0.31
HMGXB3-201ENST00000502717 STEAP4Q687X5 459 aa17.02■□□□□ 0.31
HMGXB3-201ENST00000502717 LBX2Q6XYB7 198 aa17.02■□□□□ 0.31
HMGXB3-201ENST00000502717 HACD2Q6Y1H2 254 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms