RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 SMPD3Q9NY59 655 aaPredicted RBP11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 GPRC5BQ9NZH0 403 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 PCDHGA11Q9Y5H2 935 aa11.1□□□□□ -0.63
AC055713.1-201ENST00000498967 CLUHO75153 1309 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 CREBL2O60519 120 aaPredicted RBP11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 TPH1P17752 444 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 ZNF484Q5JVG2 852 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 ZNF767PQ75MW2 155 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 PHYKPLQ8IUZ5 450 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 CEP97Q8IW35 865 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 OR10H4Q8NGA5 316 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 EZH1Q92800 747 aaPredicted RBP11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 ISCA1Q9BUE6 129 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 EIF5A2Q9GZV4 153 aaKnown RBP11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 UROSP10746 265 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 IFI30P13284 250 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 ZNF773Q6PK81 442 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 KCTD8Q6ZWB6 473 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 FAM47BQ8NA70 645 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 PCDHB9Q9Y5E1 797 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 ATE1O95260 518 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 GPIP06744 558 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 ZNF35P13682 527 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 CTHP32929 405 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 RAB4BP61018 213 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 ITPK1Q13572 414 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 MOGSQ13724 837 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 WSCD2Q2TBF2 565 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 BEND4Q6ZU67 534 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 SEMA4DQ92854 862 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 NANSQ9NR45 359 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 PCDHGA8Q9Y5G5 932 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 LOC100509620A0A075B734 347 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 ZNF726A6NNF4 738 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 CHADO15335 359 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 BNIP1Q12981 228 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 MLC1Q15049 377 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 PQLC1Q8N2U9 271 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 CHST13Q8NET6 341 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 IFT27Q9BW83 186 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 IRF2BPLQ9H1B7 796 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 ANKHQ9HCJ1 492 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 STARD7Q9NQZ5 370 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 NUP214P35658 2090 aaPredicted RBP11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 CCDC163A0A0D9SF12 145 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 TRAFD1O14545 582 aaPredicted RBP11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 PLEKP08567 350 aaPredicted RBP11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 SSR2P43308 183 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 MAGEA3P43357 314 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 HSPA14Q0VDF9 509 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 TAF1CQ15572 869 aaPredicted RBP11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 TAS1R3Q7RTX0 852 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 LINC00471Q8N535 108 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 COQ8AQ8NI60 647 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 RBM18Q96H35 190 aaKnown RBP11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 ZDHHC15Q96MV8 337 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 SERINC1Q9NRX5 453 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 AGPAT5Q9NUQ2 364 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 M0R233 179 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 TSHRP16473 764 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 RIDAP52758 137 aaKnown RBP11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 SLC20A2Q08357 652 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 VWA5B1Q5TIE3 1220 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 METTL16Q86W50 562 aaKnown RBP11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 RBFAQ8N0V3 343 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 TOMM5Q8N4H5 51 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 OR2T12Q8NG77 320 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 SNTG1Q9NSN8 517 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 RAP2CQ9Y3L5 183 aa11.09□□□□□ -0.63
AC055713.1-201ENST00000498967 FAM196BA6NMK8 535 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF705EA8MWA4 302 aaPredicted RBP11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 ERAL1O75616 437 aaKnown RBP11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 COX4I1P13073 169 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 IDH3GP51553 393 aaPredicted RBP11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 ART1P52961 327 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF101Q8IZC7 436 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 TRAPPC12Q8WVT3 735 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 HTATIP2Q9BUP3 242 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 GDAP2Q9NXN4 497 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF70Q9UC06 446 aaPredicted RBP11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 FXYD6-FXYD2A0A087WZ82 144 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 ARL6IP5O75915 188 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 HGFP14210 728 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 IFNGR1P15260 489 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 MRPL49Q13405 166 aaKnown RBP11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 C6orf52Q5T4I8 152 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF517Q6ZMY9 492 aaPredicted RBP11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 CREB3L2Q70SY1 520 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 ZNF627Q7L945 461 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 FXYD6Q9H0Q3 95 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 A8MVJ9 347 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 RIPK2O43353 540 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 ACTL6BO94805 426 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 TSPAN15O95858 294 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 ITPKAP23677 461 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 PLK1P53350 603 aa11.08□□□□□ -0.64
AC055713.1-201ENST00000498967 SULT2A1Q06520 285 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms