RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 CCM2Q9BSQ5 444 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 MCMBPQ9BTE3 642 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 AARSD1Q9BTE6 412 aaKnown RBP12.25□□□□□ -0.45
SNX17-208ENST00000493711 BOCQ9BWV1 1114 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 SLC13A1Q9BZW2 595 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 ACBD3Q9H3P7 528 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 POPDC3Q9HBV1 291 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 LATS2Q9NRM7 1088 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 TRNAU1APQ9NX07 287 aaKnown RBP12.25□□□□□ -0.45
SNX17-208ENST00000493711 TAS2R13Q9NYV9 303 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 ZNHIT2Q9UHR6 403 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 MOSPD1Q9UJG1 213 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 GMEB2Q9UKD1 530 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 ANKRD6Q9Y2G4 727 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 CRYL1Q9Y2S2 319 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 VWA7Q9Y334 891 aa12.25□□□□□ -0.45
SNX17-208ENST00000493711 MGAT4DA6NG13 374 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 GOLGA6L10A6NI86 522 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 FOXD2O60548 495 aaPredicted RBP12.24□□□□□ -0.45
SNX17-208ENST00000493711 DNAJC6O75061 913 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 MTX2O75431 263 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 CSF2P04141 144 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 WNT1P04628 370 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 ITGA2BP08514 1039 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 NME1P15531 152 aaKnown RBP12.24□□□□□ -0.45
SNX17-208ENST00000493711 CHRM3P20309 590 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 CRABP2P29373 138 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 CA5AP35218 305 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 NBL1P41271 181 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 CTSKP43235 329 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 ID4P47928 161 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 ARRB1P49407 418 aaPredicted RBP12.24□□□□□ -0.45
SNX17-208ENST00000493711 CLCNKAP51800 687 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 HK3P52790 923 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 HNRNPKP61978 463 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNX17-208ENST00000493711 TTLL9Q3SXZ7 439 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 KHDC1Q4VXA5 237 aaKnown RBP12.24□□□□□ -0.45
SNX17-208ENST00000493711 PYCR3Q53H96 274 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 UBAP2Q5T6F2 1119 aaKnown RBP12.24□□□□□ -0.45
SNX17-208ENST00000493711 LRRC8EQ6NSJ5 796 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 AMZ2Q86W34 360 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 SLC22A18ASQ8N1D0 253 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 FSTL5Q8N475 847 aaPredicted RBP12.24□□□□□ -0.45
SNX17-208ENST00000493711 CLDN19Q8N6F1 224 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 GPATCH11Q8N954 259 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 OR2L2Q8NH16 312 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 DCAKDQ8WVC6 231 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 OR1E3Q8WZA6 343 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 ELMO2Q96JJ3 720 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 NUSAP1Q9BXS6 441 aaKnown RBP12.24□□□□□ -0.45
SNX17-208ENST00000493711 STMN4Q9H169 189 aaPredicted RBP12.24□□□□□ -0.45
SNX17-208ENST00000493711 CARS2Q9HA77 564 aaKnown RBP12.24□□□□□ -0.45
SNX17-208ENST00000493711 CYP4F12Q9HCS2 524 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 FGF22Q9HCT0 170 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 SPATS2LQ9NUQ6 558 aaKnown RBP12.24□□□□□ -0.45
SNX17-208ENST00000493711 TMEM74BQ9NUR3 256 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 SUFUQ9UMX1 484 aa12.24□□□□□ -0.45
SNX17-208ENST00000493711 ANKRD36A6QL64 1941 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 PLXND1Q9Y4D7 1925 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 A0A1B0GVT2 93 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 FAM95CA0A1B0GW59 222 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 OR2AG2A6NM03 316 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 EIF3FO00303 357 aaPredicted RBP12.23□□□□□ -0.45
SNX17-208ENST00000493711 LIN7AO14910 233 aaPredicted RBP12.23□□□□□ -0.45
SNX17-208ENST00000493711 KHNYNO15037 678 aaKnown RBP12.23□□□□□ -0.45
SNX17-208ENST00000493711 ATP8B1O43520 1251 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 LRP3O75074 770 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 POP7O75817 140 aaKnown RBP12.23□□□□□ -0.45
SNX17-208ENST00000493711 SHBGP04278 402 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 CFIP05156 583 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 APOA4P06727 396 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 CBSLP0DN79 551 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 STMN1P16949 149 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 ATP5DP30049 168 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 CBSP35520 551 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 MPLP40238 635 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 SLC26A3P40879 764 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 MAPK9P45984 424 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 GNPDA1P46926 289 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 SERPINB8P50452 374 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 CTSCP53634 463 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 DMPKQ09013 629 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 ILF3Q12906 894 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNX17-208ENST00000493711 RPA4Q13156 261 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 USP10Q14694 798 aaKnown RBP12.23□□□□□ -0.45
SNX17-208ENST00000493711 EFTUD2Q15029 972 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNX17-208ENST00000493711 ELOCQ15369 112 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 ALG11Q2TAA5 492 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 ZNF789Q5FWF6 425 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 CTSL3PQ5NE16 218 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 PLEKHS1Q5SXH7 462 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 HECTD2Q5U5R9 776 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 DET1Q7L5Y6 550 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 HID1Q8IV36 788 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 PHACTR4Q8IZ21 702 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 BEND7Q8N7W2 519 aaPredicted RBP12.23□□□□□ -0.45
SNX17-208ENST00000493711 HM13Q8TCT9 377 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 ASZ1Q8WWH4 475 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 ANKRD7Q92527 254 aa12.23□□□□□ -0.45
SNX17-208ENST00000493711 MRRFQ96E11 262 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms