RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 TLCD2A6NGC4 264 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 IPO13O94829 963 aaKnown RBP13.53□□□□□ -0.24
ATG4B-222ENST00000491867 ZNF7P17097 686 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-222ENST00000491867 HTR1EP28566 365 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 RORAP35398 523 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 MMP13P45452 471 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 SPINT3P49223 89 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 DRG2P55039 364 aaKnown RBP13.53□□□□□ -0.24
ATG4B-222ENST00000491867 MYL5Q02045 173 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 MAMLD1Q13495 774 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 DNTTIP2Q5QJE6 756 aaKnown RBP13.53□□□□□ -0.24
ATG4B-222ENST00000491867 DCAF10Q5QP82 559 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 SPOCD1Q6ZMY3 1216 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 NXPE1Q8N323 547 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 CLEC1AQ8NC01 280 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 ITLN2Q8WWU7 325 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-222ENST00000491867 CLIP3Q96DZ5 547 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 TRAPPC9Q96Q05 1148 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 CHST11Q9NPF2 352 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 TAS2R14Q9NYV8 317 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 PCSK1NQ9UHG2 260 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 DNPEPQ9ULA0 475 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 CSAG2Q9Y5P2 127 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 JMJD1CQ15652 2540 aa13.53□□□□□ -0.24
ATG4B-222ENST00000491867 ABCA4P78363 2273 aa13.52□□□□□ -0.24
ATG4B-222ENST00000491867 LRRC10BA6NIK2 292 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 KLHL41O60662 606 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 MAFKO60675 156 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 SLC25A14O95258 325 aaPredicted RBP13.52□□□□□ -0.25
ATG4B-222ENST00000491867 CCDC172P0C7W6 258 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 FERP16591 822 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 IL4RP24394 825 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 PSMA2P25787 234 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 DPYSQ14117 519 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 NCF4Q15080 339 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 PTCHD3Q3KNS1 767 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 ERMARDQ5T6L9 678 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 MARC1Q5VT66 337 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 AGAP9Q5VTM2 703 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 PPP1R2P3Q6NXS1 205 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 KLHL35Q6PF15 583 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 WASH2PQ6VEQ5 465 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 CLEC17AQ6ZS10 378 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 APTXQ7Z2E3 356 aaKnown RBP13.52□□□□□ -0.25
ATG4B-222ENST00000491867 ADGRG6Q86SQ4 1221 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 PARP9Q8IXQ6 854 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 SYTL1Q8IYJ3 562 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 ZNF295-AS1Q8N0V1 137 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 FAR1Q8WVX9 515 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 FER1L6-AS2Q96M78 137 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 PEBP4Q96S96 227 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 CD180Q99467 661 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 SYT11Q9BT88 431 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 SNRNP25Q9BV90 132 aaKnown RBP13.52□□□□□ -0.25
ATG4B-222ENST00000491867 TRIM39Q9HCM9 518 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 NT5MQ9NPB1 228 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 PARVAQ9NVD7 372 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 DTLQ9NZJ0 730 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 NOVA2Q9UNW9 492 aaKnown RBP13.52□□□□□ -0.25
ATG4B-222ENST00000491867 CHKBQ9Y259 395 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 DOCK10Q96BY6 2186 aa13.52□□□□□ -0.25
ATG4B-222ENST00000491867 CCDC88CQ9P219 2028 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 C1orf232A0A0U1RR37 186 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 MASP2O00187 686 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 CHUKO15111 745 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 KMOO15229 486 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 DDX3YO15523 660 aaKnown RBP13.51□□□□□ -0.25
ATG4B-222ENST00000491867 ATMINO43313 823 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-222ENST00000491867 LCA5LO95447 670 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 ZBTB11O95625 1053 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-222ENST00000491867 BPIP17213 487 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 IDSP22304 550 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 FECHP22830 423 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 KRTAP10-9P60411 292 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 ITKQ08881 620 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 ABRQ12979 859 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 IHHQ14623 411 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 HIF1AQ16665 826 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 ZNF630Q2M218 657 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-222ENST00000491867 VWA2Q5GFL6 755 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 TMTC4Q5T4D3 741 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 PLEKHA7Q6IQ23 1121 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 BNC2Q6ZN30 1099 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-222ENST00000491867 CYP4V2Q6ZWL3 525 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-222ENST00000491867 IRF2BP2Q7Z5L9 587 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 LRRTM4Q86VH4 590 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 RAVER1Q8IY67 606 aaKnown RBP13.51□□□□□ -0.25
ATG4B-222ENST00000491867 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.51□□□□□ -0.25
ATG4B-222ENST00000491867 NSMCE1Q8WV22 266 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 RELTQ969Z4 430 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 WDR77Q9BQA1 342 aaPredicted RBP13.51□□□□□ -0.25
ATG4B-222ENST00000491867 TIMM29Q9BSF4 260 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 HSD3B7Q9H2F3 369 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 PCMTD2Q9NV79 361 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 PKD2L2Q9NZM6 624 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 CWC15Q9P013 229 aaKnown RBP13.51□□□□□ -0.25
ATG4B-222ENST00000491867 WDR37Q9Y2I8 494 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 CACNA1CQ13936 2221 aa13.51□□□□□ -0.25
ATG4B-222ENST00000491867 AKAP6Q13023 2319 aa13.5□□□□□ -0.25
ATG4B-222ENST00000491867 A0A1W2PQJ5 194 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms