RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SERPINA6P08185 405 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 CES1P23141 567 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 RBL1P28749 1068 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 CRABP2P29373 138 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 BNIP3Q12983 259 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 IRF4Q15306 451 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 CNGA3Q16281 694 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 DBX2Q6ZNG2 339 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 CDHR3Q6ZTQ4 885 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 MYLK4Q86YV6 388 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-219ENST00000491747 TREML1Q86YW5 311 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 NUDCD3Q8IVD9 361 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 KBTBD2Q8IY47 623 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 PELI3Q8N2H9 469 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 CBARPQ8N350 705 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-219ENST00000491747 PAF1Q8N7H5 531 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 PLA2G15Q8NCC3 412 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 DEFB124Q8NES8 71 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 FUBP1Q96AE4 644 aaKnown RBP9.32□□□□□ -0.92
BRCA1-219ENST00000491747 SCRN2Q96FV2 425 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 IMP4Q96G21 291 aaKnown RBP9.32□□□□□ -0.92
BRCA1-219ENST00000491747 CFAP36Q96G28 342 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 TEKT5Q96M29 485 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 ELF4Q99607 663 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-219ENST00000491747 SIKE1Q9BRV8 207 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 GLOD4Q9HC38 313 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 PAK5Q9P286 719 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 PNMA8BQ9ULN7 279 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-219ENST00000491747 BTBD3Q9Y2F9 522 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 F5H423 210 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-219ENST00000491747 FPGTO14772 594 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 KCNK5O95279 499 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 LYNP07948 512 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 VIPR1P32241 457 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 HNF1BP35680 557 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 AQP5P55064 265 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 PFN3P60673 137 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 DYNC1I2Q13409 638 aaKnown RBP9.32□□□□□ -0.92
BRCA1-219ENST00000491747 AGERQ15109 404 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 CHI3L2Q15782 390 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 KYAT3Q6YP21 454 aaKnown RBP9.32□□□□□ -0.92
BRCA1-219ENST00000491747 RFLNAQ6ZTI6 216 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 DGLUCYQ7Z3D6 616 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 KDELC2Q7Z4H8 507 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 HSD11B1LQ7Z5J1 315 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 PTAR1Q7Z6K3 402 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-219ENST00000491747 GATAD2AQ86YP4 633 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 ZNF567Q8N184 647 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 HTR3CQ8WXA8 447 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 COQ10AQ96MF6 247 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 RILPQ96NA2 401 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 PANX3Q96QZ0 392 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 MCCC1Q96RQ3 725 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-219ENST00000491747 TRIB3Q96RU7 358 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 ECSITQ9BQ95 431 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 MECRQ9BV79 373 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 RAB6BQ9NRW1 208 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 UBP1Q9NZI7 540 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 ZC3H7BQ9UGR2 993 aaKnown RBP9.32□□□□□ -0.92
BRCA1-219ENST00000491747 SLC7A8Q9UHI5 535 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 SOX13Q9UN79 622 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 SCN8AQ9UQD0 1980 aa9.32□□□□□ -0.92
BRCA1-219ENST00000491747 A0A0J9YYE9 177 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 A0A1W2PQ67 120 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 HACD1B0YJ81 288 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 H7C0C1 242 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 BIRC5O15392 142 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 LZTS3O60299 673 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-219ENST00000491747 RECQL5O94762 991 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-219ENST00000491747 BAG2O95816 211 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 TRBC1P01850 177 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 ELFN1P0C7U0 828 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 UBTFL6P0CB48 400 aaPredicted RBP9.31□□□□□ -0.92
BRCA1-219ENST00000491747 ZNF883P0CG24 379 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 NFKB1P19838 968 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 CCNFP41002 786 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 ATP5OP48047 213 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 SLC14A1Q13336 389 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 FZD2Q14332 565 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 ZNF542PQ5EBM4 170 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 FOXB2Q5VYV0 432 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 AAGABQ6PD74 315 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 CRTC1Q6UUV9 634 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 KANSL1Q7Z3B3 1105 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 CCNJLQ8IV13 435 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 WDR75Q8IWA0 830 aaKnown RBP9.31□□□□□ -0.92
BRCA1-219ENST00000491747 PHC3Q8NDX5 983 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 DENND6BQ8NEG7 585 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 LPCAT1Q8NF37 534 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 LRRC39Q96DD0 335 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 TTC1Q99614 292 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 GORASP1Q9BQQ3 440 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 SLC13A1Q9BZW2 595 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 SLC25A51Q9H1U9 297 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 VCX3BQ9H321 246 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 ERVMER34-1Q9H9K5 563 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 IL1RAPL1Q9NZN1 696 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 KLF15Q9UIH9 416 aa9.31□□□□□ -0.92
BRCA1-219ENST00000491747 ALDH18A1P54886 795 aaKnown RBP9.31□□□□□ -0.92
BRCA1-219ENST00000491747 SH3BGRP55822 239 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms