RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 TCF12Q99081 682 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 CYTH2Q99418 400 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 TDRD1Q9BXT4 1180 aaKnown RBP7.52□□□□□ -1.21
CLDN1-202ENST00000490800 CENPHQ9H3R5 247 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 ZDHHC6Q9H6R6 413 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 PPCSQ9HAB8 311 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 UCKL1Q9NWZ5 548 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 VPS18Q9P253 973 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 DKK4Q9UBT3 224 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 CTNNAL1Q9UBT7 734 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 SLC24A2Q9UI40 661 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 CHKBQ9Y259 395 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 FADS3Q9Y5Q0 445 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 HS3ST3A1Q9Y663 406 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 RPS6KL1Q9Y6S9 549 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 FAM169AQ9Y6X4 670 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 CELSR3Q9NYQ7 3312 aa7.52□□□□□ -1.21
CLDN1-202ENST00000490800 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.51□□□□□ -1.21
CLDN1-202ENST00000490800 CCDC78A2IDD5 438 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 POM121BA6NF01 834 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 IGLON5A6NGN9 336 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 MROH6A6NGR9 719 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 C16orf96A6NNT2 1141 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 HMGB1P1B2RPK0 211 aaPredicted RBP7.51□□□□□ -1.21
CLDN1-202ENST00000490800 TRAFD1O14545 582 aaPredicted RBP7.51□□□□□ -1.21
CLDN1-202ENST00000490800 RAD51BO15315 384 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 RGS16O15492 202 aaPredicted RBP7.51□□□□□ -1.21
CLDN1-202ENST00000490800 HTRA2O43464 458 aaPredicted RBP7.51□□□□□ -1.21
CLDN1-202ENST00000490800 UGT1A9O60656 530 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 CDH16O75309 829 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 PGLSO95336 258 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 PIGNO95427 931 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 POP4O95707 220 aaKnown RBP7.51□□□□□ -1.21
CLDN1-202ENST00000490800 PRKCGP05129 697 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 POLBP06746 335 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 PDHA1P08559 390 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 GIMD1P0DJR0 217 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 ERVK-10P10266 1014 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 MYF5P13349 255 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 ITGB7P26010 798 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 GSTT1P30711 240 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 MSH2P43246 934 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 SNRPD1P62314 119 aaKnown RBP7.51□□□□□ -1.21
CLDN1-202ENST00000490800 RPS21P63220 83 aaKnown RBP7.51□□□□□ -1.21
CLDN1-202ENST00000490800 MGAT5Q09328 741 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 SGCGQ13326 291 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 SEPT6Q14141 434 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 FGL2Q14314 439 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 TMED2Q15363 201 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 COL28A1Q2UY09 1125 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 MYLK3Q32MK0 819 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 PERM1Q5SV97 790 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 HES3Q5TGS1 186 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 ESRP1Q6NXG1 681 aaKnown RBP7.51□□□□□ -1.21
CLDN1-202ENST00000490800 ZNF449Q6P9G9 518 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 PARS2Q7L3T8 475 aaKnown RBP7.51□□□□□ -1.21
CLDN1-202ENST00000490800 ABI3BPQ7Z7G0 1075 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 TTC7BQ86TV6 843 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 CAMK1DQ8IU85 385 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 SLC22A18ASQ8N1D0 253 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 RIBC1Q8N443 379 aaPredicted RBP7.51□□□□□ -1.21
CLDN1-202ENST00000490800 PPM1NQ8N819 430 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 SLC44A1Q8WWI5 657 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 PKNOX2Q96KN3 472 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 KLHL32Q96NJ5 620 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 SMIM14Q96QK8 99 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 PAFAH2Q99487 392 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 UGT1A7Q9HAW7 530 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 UGT1A10Q9HAW8 530 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 UGT1A8Q9HAW9 530 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 IGSF5Q9NSI5 407 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 TREX1Q9NSU2 369 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 IL1RAPL1Q9NZN1 696 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 SLC17A6Q9P2U8 582 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 PSMC3IPQ9P2W1 217 aaPredicted RBP7.51□□□□□ -1.21
CLDN1-202ENST00000490800 SLC2A6Q9UGQ3 507 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 SPO11Q9Y5K1 396 aa7.51□□□□□ -1.21
CLDN1-202ENST00000490800 PTPRBP23467 1997 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 PKD1L2Q7Z442 2459 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ELOA3CA0A087WX78 387 aaPredicted RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 TMEM238LA0A1B0GVL6 79 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 HEATR9A2RTY3 570 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ELOA3DA6NLF2 546 aaPredicted RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 A6NNZ2 444 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ADARB2-AS1A8MUL3 147 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 FOXO6A8MYZ6 492 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 ANKRD66B4E2M5 251 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 NEMP1O14524 444 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 FPGTO14772 594 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 POLR3GO15318 223 aaPredicted RBP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 FFAR2O15552 330 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 TSPAN6O43657 245 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 LDB2O43679 373 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 AP1G1O43747 822 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 SOCS5O75159 536 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 PIAS2O75928 621 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 SMNDC1O75940 238 aaKnown RBP eCLIP7.5□□□□□ -1.21
CLDN1-202ENST00000490800 FAM155BO75949 473 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 UGT2B4P06133 528 aa7.5□□□□□ -1.21
CLDN1-202ENST00000490800 PIRTP0C851 137 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms