RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 SLC25A12O75746 678 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 NEURL1O76050 574 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 IQCF3P0C7M6 154 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 FUT1P19526 365 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 RPA1P27694 616 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 NTSR1P30989 418 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 CLCN3P51790 818 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 CXADRP78310 365 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 PDCLQ13371 301 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 TNK1Q13470 666 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 LY6KQ17RY6 165 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 GLE1Q53GS7 698 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 TTC39AQ5SRH9 613 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 TRMT10BQ6PF06 316 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 FIP1L1Q6UN15 594 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 PACS1Q6VY07 963 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 RBM43Q6ZSC3 357 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 Q6ZWC4 215 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 CCDC91Q7Z6B0 441 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 RHPN2Q8IUC4 686 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 ARID3BQ8IVW6 561 aaPredicted RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 ARL14Q8N4G2 192 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 BMPERQ8N8U9 685 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 RNASE8Q8TDE3 154 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 UTP14AQ9BVJ6 771 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 HDHD5Q9BXW7 423 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 P2RY12Q9H244 342 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 RANGRFQ9HD47 186 aaPredicted RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 MKKSQ9NPJ1 570 aaPredicted RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 SLC6A13Q9NSD5 602 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 FAM212BQ9NTI7 297 aaPredicted RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 RNF146Q9NTX7 359 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 TFCP2L1Q9NZI6 479 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 CDC42EP3Q9UKI2 254 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 KCNK7Q9Y2U2 307 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 DDX49Q9Y6V7 483 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 COL24A1Q17RW2 1714 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 PXDNQ92626 1479 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 RNF222A6NCQ9 220 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 AP4M1O00189 453 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 MPHOSPH10O00566 681 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 ANKRD28O15084 1053 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 TLX2O43763 284 aaPredicted RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 TMPRSS11DO60235 418 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 ZNF853P0CG23 659 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 EGR2P11161 476 aaPredicted RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 WT1P19544 449 aaPredicted RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 NR4A1P22736 598 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 MAGEA11P43364 429 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 NT5C2P49902 561 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 PLCD1P51178 756 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 SLC37A1P57057 533 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 SIM1P81133 766 aaPredicted RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 FAM27E3Q08E93 113 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 PRPF4BQ13523 1007 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 IL13RA2Q14627 380 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 RABL6Q3YEC7 729 aaPredicted RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 IQCCQ4KMZ1 466 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 RNASE12Q5GAN4 147 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 IL20RBQ6UXL0 311 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 ARHGAP27Q6ZUM4 889 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 NBPF5PQ86XG9 351 aaPredicted RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 TMC8Q8IU68 726 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 RBFAQ8N0V3 343 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 C8orf58Q8NAV2 365 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 STAMQ92783 540 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 PDLIM2Q96JY6 352 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 DIRC2Q96SL1 478 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 ARHGEF3Q9NR81 526 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 GLRX2Q9NS18 164 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 DONSONQ9NYP3 566 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 CCNL1Q9UK58 526 aaPredicted RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 MKLN1Q9UL63 735 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 HPCAL4Q9UM19 191 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 RUVBL1Q9Y265 456 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 TDRKHQ9Y2W6 561 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 PCDHB2Q9Y5E7 798 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 GLI3P10071 1580 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 GOLGA6L7A0A1B0GV03 622 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 PIPSLA2A3N6 862 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 PLSCR1O15162 318 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 NXPH3O95157 252 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 PGK2P07205 417 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 MYF6P23409 242 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 CASQ1P31415 396 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 DCTDP32321 178 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 MRPL12P52815 198 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 YWHAZP63104 245 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 TEX35Q5T0J7 233 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 CCNYL2Q5T2Q4 361 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 RNASEH2BQ5TBB1 312 aaKnown RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 MOXD1Q6UVY6 613 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 ARHGEF19Q8IW93 802 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 CADM3Q8N126 398 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 D2HGDHQ8N465 521 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 MYEOVQ96EZ4 313 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 TCHPQ9BT92 498 aa2.92□□□□□ -1.94
UBXN4-208ENST00000490163 CINPQ9BW66 212 aaPredicted RBP2.92□□□□□ -1.94
UBXN4-208ENST00000490163 SYTL2Q9HCH5 934 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms