RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 MRM3Q9HC36 420 aaKnown RBP17.04■□□□□ 0.32
MDC1-206ENST00000489540 XAB2Q9HCS7 855 aaKnown RBP17.04■□□□□ 0.32
MDC1-206ENST00000489540 SCHIP1Q9P0W5 487 aaPredicted RBP17.04■□□□□ 0.32
MDC1-206ENST00000489540 SPEGQ15772 3267 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 IGHV1OR21-1A0A087WYE8 117 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 MAGEB16A2A368 324 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 QSOX1O00391 747 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 GSTM1P09488 218 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 PRSS56P0CW18 603 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 BRAFP15056 766 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 MGAT1P26572 445 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 CASQ1P31415 396 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 CCKBRP32239 447 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 SLC19A1P41440 591 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 NSG1P42857 185 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 LSSP48449 732 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 EPHA4P54764 986 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 DRG2P55039 364 aaKnown RBP17.03■□□□□ 0.32
MDC1-206ENST00000489540 ETF1P62495 437 aaKnown RBP17.03■□□□□ 0.32
MDC1-206ENST00000489540 GSTM4Q03013 218 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 ZFP36L1Q07352 338 aaKnown RBP17.03■□□□□ 0.32
MDC1-206ENST00000489540 NFE2L1Q14494 772 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 FASTKD1Q53R41 847 aaKnown RBP17.03■□□□□ 0.32
MDC1-206ENST00000489540 ANKRD22Q5VYY1 191 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 SYDE1Q6ZW31 735 aaPredicted RBP17.03■□□□□ 0.32
MDC1-206ENST00000489540 USP53Q70EK8 1073 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 RBM12BQ8IXT5 1001 aaKnown RBP17.03■□□□□ 0.32
MDC1-206ENST00000489540 LSMEM2Q8N112 164 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 OR10G6Q8NH81 332 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 ZCCHC14Q8WYQ9 949 aaKnown RBP17.03■□□□□ 0.32
MDC1-206ENST00000489540 ATXN7L3BQ96GX2 97 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 AHCYL2Q96HN2 611 aaKnown RBP17.03■□□□□ 0.32
MDC1-206ENST00000489540 POLR1BQ9H9Y6 1135 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 TREX1Q9NSU2 369 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 POT1Q9NUX5 634 aa17.03■□□□□ 0.32
MDC1-206ENST00000489540 ZNF624Q9P2J8 865 aaPredicted RBP17.03■□□□□ 0.32
MDC1-206ENST00000489540 ATXN7L1Q9ULK2 861 aaPredicted RBP17.03■□□□□ 0.32
MDC1-206ENST00000489540 SCN8AQ9UQD0 1980 aa17.02■□□□□ 0.32
MDC1-206ENST00000489540 OR51F1A6NGY5 319 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 F8W8V4 182 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 CCDC188H7C350 402 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 PBLDP30039 288 aaPredicted RBP17.02■□□□□ 0.31
MDC1-206ENST00000489540 PDX1P52945 283 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 CRADDP78560 199 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 EIF3IQ13347 325 aaKnown RBP17.02■□□□□ 0.31
MDC1-206ENST00000489540 CLCA4Q14CN2 919 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 MAP9Q49MG5 647 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 AARS2Q5JTZ9 985 aaKnown RBP17.02■□□□□ 0.31
MDC1-206ENST00000489540 PACS1Q6VY07 963 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 FAM83HQ6ZRV2 1179 aaPredicted RBP17.02■□□□□ 0.31
MDC1-206ENST00000489540 PCGF5Q86SE9 256 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 CAND1Q86VP6 1230 aaKnown RBP17.02■□□□□ 0.31
MDC1-206ENST00000489540 PPIL6Q8IXY8 311 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 CFAP206Q8IYR0 622 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 C17orf53Q8N3J3 647 aaPredicted RBP17.02■□□□□ 0.31
MDC1-206ENST00000489540 MDM1Q8TC05 714 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 CXorf40BQ96DE9 158 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 LIN37Q96GY3 246 aaPredicted RBP17.02■□□□□ 0.31
MDC1-206ENST00000489540 CCM2Q9BSQ5 444 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 EPB41L1Q9H4G0 881 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 ASIC3Q9UHC3 531 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 ANAPC5Q9UJX4 755 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 WDR37Q9Y2I8 494 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 PTPRBP23467 1997 aa17.02■□□□□ 0.31
MDC1-206ENST00000489540 ARHGEF17Q96PE2 2063 aaPredicted RBP17.01■□□□□ 0.31
MDC1-206ENST00000489540 CCDC187A0A096LP49 1063 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 LILRA5A6NI73 299 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 SDR42E2A6NKP2 422 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 FANCGO15287 622 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 PTK6Q13882 451 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 ST3GAL2Q16842 350 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 NKAIN2Q5VXU1 208 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 TMEM26Q6ZUK4 368 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 B3GNT8Q7Z7M8 397 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 ZNF761Q86XN6 746 aaPredicted RBP17.01■□□□□ 0.31
MDC1-206ENST00000489540 KLHL7Q8IXQ5 586 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 NAT8LQ8N9F0 302 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 WDR36Q8NI36 951 aaKnown RBP17.01■□□□□ 0.31
MDC1-206ENST00000489540 HM13Q8TCT9 377 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 NAT14Q8WUY8 206 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 TMEM159Q96B96 161 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 CCDC97Q96F63 343 aaPredicted RBP17.01■□□□□ 0.31
MDC1-206ENST00000489540 FOXP3Q9BZS1 431 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 RDH14Q9HBH5 336 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 SLC40A1Q9NP59 571 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 SYBUQ9NX95 663 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 SOX13Q9UN79 622 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 PCDHGA8Q9Y5G5 932 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 CHD8Q9HCK8 2581 aa17.01■□□□□ 0.31
MDC1-206ENST00000489540 RP1P56715 2156 aa17■□□□□ 0.31
MDC1-206ENST00000489540 PLXNB3Q9ULL4 1909 aa17■□□□□ 0.31
MDC1-206ENST00000489540 OR52A4PA6NMU1 304 aa17■□□□□ 0.31
MDC1-206ENST00000489540 DUX1O43812 170 aa17■□□□□ 0.31
MDC1-206ENST00000489540 AVILO75366 819 aa17■□□□□ 0.31
MDC1-206ENST00000489540 TMEM63AO94886 807 aa17■□□□□ 0.31
MDC1-206ENST00000489540 MPOP05164 745 aa17■□□□□ 0.31
MDC1-206ENST00000489540 NMBRP28336 390 aa17■□□□□ 0.31
MDC1-206ENST00000489540 PTGIRP43119 386 aa17■□□□□ 0.31
MDC1-206ENST00000489540 GABREP78334 506 aa17■□□□□ 0.31
MDC1-206ENST00000489540 RPE65Q16518 533 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms